RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 HSPB11Q9Y547 144 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 A0A0G2JLM5 398 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 CD28P10747 220 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 S100A11P31949 105 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 KRTAP10-3P60369 221 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 HBG1P69891 147 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 HBG2P69892 147 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 ETFRF1Q6IPR1 90 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 VN1R17PQ8TDU5 208 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 CXorf58Q96LI9 332 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 SLC38A11Q08AI6 406 aa16.91■□□□□ 0.3
ECHDC3-205ENST00000496136 HIST2H2BDQ6DRA6 164 aa16.91■□□□□ 0.3
ECHDC3-205ENST00000496136 OR5C1Q8NGR4 320 aa16.91■□□□□ 0.3
ECHDC3-205ENST00000496136 MRPL36Q9P0J6 103 aaKnown RBP16.91■□□□□ 0.3
ECHDC3-205ENST00000496136 RPS10-NUDT3A0A1W2PQS6 291 aa16.9■□□□□ 0.3
ECHDC3-205ENST00000496136 SCAF4O95104 1147 aaKnown RBP16.9■□□□□ 0.3
ECHDC3-205ENST00000496136 GAMTQ14353 236 aa16.9■□□□□ 0.3
ECHDC3-205ENST00000496136 SLC16A13Q7RTY0 426 aa16.9■□□□□ 0.3
ECHDC3-205ENST00000496136 TMEM158Q8WZ71 300 aa16.9■□□□□ 0.3
ECHDC3-205ENST00000496136 UBE2E2Q96LR5 201 aa16.9■□□□□ 0.3
ECHDC3-205ENST00000496136 IGHV3-11P01762 117 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 IGHV3-23P01764 117 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 EIF2B2P49770 351 aaKnown RBP16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 DLK1P80370 383 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 OR1S2Q8NGQ3 325 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 WFDC12Q8WWY7 111 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 GGACTQ9BVM4 153 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 C21orf62Q9NYP8 219 aa16.89■□□□□ 0.3
ECHDC3-205ENST00000496136 TENM1Q9UKZ4 2725 aa16.89■□□□□ 0.29
ECHDC3-205ENST00000496136 CXCL2P19875 107 aa16.89■□□□□ 0.29
ECHDC3-205ENST00000496136 OR2F1Q13607 317 aa16.89■□□□□ 0.29
ECHDC3-205ENST00000496136 TMEM116Q8NCL8 245 aa16.89■□□□□ 0.29
ECHDC3-205ENST00000496136 ZNF502Q8TBZ5 544 aa16.89■□□□□ 0.29
ECHDC3-205ENST00000496136 EEF1AKMT3Q96AZ1 226 aa16.89■□□□□ 0.29
ECHDC3-205ENST00000496136 TRBV7-1A0A0A6YYK4 115 aa16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 TCRBV4S1A1TA0A5B7 111 aa16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 CDX1P47902 265 aaPredicted RBP16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 MFAP4P55083 255 aa16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 LGALSLQ3ZCW2 172 aaPredicted RBP16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 ACSM6Q6P461 480 aa16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 LILRB2Q8N423 598 aa16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 CITED2Q99967 270 aaPredicted RBP16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 SMIM3Q9BZL3 60 aa16.88■□□□□ 0.29
ECHDC3-205ENST00000496136 F8W735 103 aaPredicted RBP16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 ZNF345Q14585 488 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 CLINT1Q14677 625 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 ATP6V1FQ16864 119 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 ZNF343Q6P1L6 599 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 OR4X1Q8NH49 305 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 NPIPB3Q92617 1050 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 ACY3Q96HD9 319 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 CCDC140Q96MF4 163 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 GNB4Q9HAV0 340 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 COL6A5A8TX70 2615 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 FNDC10F2Z333 226 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 CLEC3BP05452 202 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 RND2P52198 227 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 NKX2-5P52952 324 aaPredicted RBP16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 KCNRGQ8N5I3 272 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 UBAC2Q8NBM4 344 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 SLC35E1Q96K37 410 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 OR5B12Q96R08 314 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 FBXL17Q9UF56 701 aa16.87■□□□□ 0.29
ECHDC3-205ENST00000496136 FCGR2BP31994 310 aaPredicted RBP16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 VWC2Q2TAL6 325 aa16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 KHDC1LQ5JSQ8 128 aa16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 CLEC19AQ6UXS0 136 aa16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 TXN2Q99757 166 aa16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 WFDC1Q9HC57 220 aa16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 NPVFQ9HCQ7 196 aa16.86■□□□□ 0.29
ECHDC3-205ENST00000496136 A0A0D9SG52 128 aa16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 SMCO3A2RU48 225 aa16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 NPBWR1P48145 328 aa16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 C18orf65Q6ZTR6 163 aa16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 TMEM147Q9BVK8 224 aa16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 UQCC1Q9NVA1 299 aa16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 TSSC4Q9Y5U2 329 aaPredicted RBP16.85■□□□□ 0.29
ECHDC3-205ENST00000496136 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 CLN5O75503 358 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 Q56UQ5 140 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 TREML4Q6UXN2 200 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 TMEM144Q7Z5S9 345 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 IGKV1OR2-108A0A075B7D4 117 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 OR2T8A6NH00 312 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 AKR1C1Q04828 323 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 LAMTOR1Q6IAA8 161 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 ATP6V0BQ99437 205 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 ATP5SQ99766 215 aa16.84■□□□□ 0.29
ECHDC3-205ENST00000496136 ANKRD34BA5PLL1 514 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 I3L521 148 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 GNG7O60262 68 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 DFFBO76075 338 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 TRBV12-3P01733 135 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 CTSGP08311 255 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 LGALS1P09382 135 aaKnown RBP16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 GPR183P32249 361 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 TMUB2Q71RG4 321 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 C9orf62Q8N4C0 152 aa16.83■□□□□ 0.28
ECHDC3-205ENST00000496136 ARL6Q9H0F7 186 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms