RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PRB1P04280 392 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 SERPINE1P05121 402 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 COX6A1P12074 109 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 YPEL3P61236 119 aaPredicted RBP1.95□□□□□ -2.1
SSR3-208ENST00000496050 MRPS25P82663 173 aaKnown RBP1.95□□□□□ -2.1
SSR3-208ENST00000496050 OR4E2Q8NGC2 313 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 PAIP2Q9BPZ3 127 aaKnown RBP1.95□□□□□ -2.1
SSR3-208ENST00000496050 PCF11O94913 1555 aaKnown RBP1.94□□□□□ -2.1
SSR3-208ENST00000496050 OR7C1O76099 320 aaPredicted RBP1.94□□□□□ -2.1
SSR3-208ENST00000496050 TCL1BO95988 128 aa1.94□□□□□ -2.1
SSR3-208ENST00000496050 C8GP07360 202 aa1.94□□□□□ -2.1
SSR3-208ENST00000496050 ZNF826PQ6ZT77 177 aa1.94□□□□□ -2.1
SSR3-208ENST00000496050 C2orf50Q96LR7 162 aa1.94□□□□□ -2.1
SSR3-208ENST00000496050 CYSLTR1Q9Y271 337 aa1.94□□□□□ -2.1
SSR3-208ENST00000496050 TRIOBPQ9H2D6 2365 aa1.94□□□□□ -2.1
SSR3-208ENST00000496050 C19orf84I3L1E1 186 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 J3QRK9 145 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 ATP5HO75947 161 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 SHBGP04278 402 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 HSD11B1P28845 292 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 CASP1P29466 404 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 SPANXN5Q5MJ07 72 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 OR5A1Q8NGJ0 315 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 ADAT1Q9BUB4 502 aaKnown RBP1.93□□□□□ -2.1
SSR3-208ENST00000496050 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 MIXL1Q9H2W2 232 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 HEATR5AQ86XA9 2040 aa1.93□□□□□ -2.1
SSR3-208ENST00000496050 MYH11P35749 1972 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 TMEM212A6NML5 194 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 SERPINA1P01009 418 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 CTAG1AP78358 180 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 RHEBQ15382 184 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 TEX36Q5VZQ5 186 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 C12orf45Q8N5I9 185 aaPredicted RBP1.92□□□□□ -2.1
SSR3-208ENST00000496050 GNPDA2Q8TDQ7 276 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 RNASE7Q9H1E1 156 aaKnown RBP1.92□□□□□ -2.1
SSR3-208ENST00000496050 MED9Q9NWA0 146 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 TVP23BQ9NYZ1 205 aa1.92□□□□□ -2.1
SSR3-208ENST00000496050 ECM29Q5VYK3 1845 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 CCDC88AQ3V6T2 1871 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 MRPS14O60783 128 aaKnown RBP1.91□□□□□ -2.1
SSR3-208ENST00000496050 OR2B3O76000 313 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 SMIM17P0DL12 118 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 CRYGAP11844 174 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 FKBP2P26885 142 aaKnown RBP1.91□□□□□ -2.1
SSR3-208ENST00000496050 SERPINI1Q99574 410 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 OR5AC2Q9NZP5 309 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 FAM32AQ9Y421 112 aaKnown RBP1.91□□□□□ -2.1
SSR3-208ENST00000496050 MUC6Q6W4X9 2439 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 ADGRL3Q9HAR2 1447 aa1.91□□□□□ -2.1
SSR3-208ENST00000496050 IGKV1D-42A0A075B6H8 117 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 CTSDP07339 412 aaPredicted RBP1.9□□□□□ -2.11
SSR3-208ENST00000496050 CST2P09228 141 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 SPI1P17947 270 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 HOXA6P31267 233 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 ZNF846Q147U1 533 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 LINC01554Q52M75 96 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 C10orf55Q5SWW7 151 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 Q6ZQT0 140 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 SLC25A40Q8TBP6 338 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 DGCR14Q96DF8 476 aaKnown RBP1.9□□□□□ -2.11
SSR3-208ENST00000496050 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 RNF122Q9H9V4 155 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 CAMSAP1Q5T5Y3 1602 aa1.9□□□□□ -2.11
SSR3-208ENST00000496050 IGKV2-40A0A087WW87 121 aaPredicted RBP1.89□□□□□ -2.11
SSR3-208ENST00000496050 TRAV14DV4A0A0A6YYC5 116 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 IGKV3D-7A0A0C4DH55 119 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 IGKV3OR2-268A0A0C4DH90 116 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 FAM159BA6NKW6 160 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 IGKV2D-40P01614 121 aaPredicted RBP1.89□□□□□ -2.11
SSR3-208ENST00000496050 ERP29P30040 261 aaKnown RBP1.89□□□□□ -2.11
SSR3-208ENST00000496050 CDK5R1Q15078 307 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 LYRM7Q5U5X0 104 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 Q6Q795 121 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 GPR146Q96CH1 333 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 ENY2Q9NPA8 101 aa1.89□□□□□ -2.11
SSR3-208ENST00000496050 A0A087X0T9 212 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 UNQ6190/PRO20217Q6UXQ8 127 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 Q6ZSA8 131 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 LCA10Q71F78 164 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 PHF13Q86YI8 300 aaPredicted RBP1.88□□□□□ -2.11
SSR3-208ENST00000496050 FAM172AQ8WUF8 416 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 PHB2Q99623 299 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 PSTPIP2Q9H939 334 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 NHP2Q9NX24 153 aaKnown RBP1.88□□□□□ -2.11
SSR3-208ENST00000496050 TAS2R4Q9NYW5 299 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 IL20Q9NYY1 176 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 EPDR1Q9UM22 224 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 MED1Q15648 1581 aaPredicted RBP1.88□□□□□ -2.11
SSR3-208ENST00000496050 CCDC88CQ9P219 2028 aa1.88□□□□□ -2.11
SSR3-208ENST00000496050 C1orf196B1AJZ1 125 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 CYB5BO43169 146 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 OR4E1P0C645 316 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 ASAH2BP0C7U1 165 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 IL9P15248 144 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 CAPZBP47756 277 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 Q8N2B8 174 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 C12orf29Q8N999 325 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms