RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 C9orf118A6NHY6 69 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 C8orf88P0DMB2 117 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 COX8AP10176 69 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 HIST1H1EP10412 219 aaKnown RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 TAS2R45P59539 299 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 C1orf229Q6ZS94 237 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 BHLHA15Q7RTS1 189 aaPredicted RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 H1FXQ92522 213 aaKnown RBP9.55□□□□□ -0.88
HDAC4-210ENST00000493582 S1PR3Q99500 378 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 PTPRBP23467 1997 aa9.55□□□□□ -0.88
HDAC4-210ENST00000493582 ZNF134P52741 427 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 GNG5P63218 68 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 HBBP68871 147 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 UTF1Q5T230 341 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 TMEM116Q8NCL8 245 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 OR2K2Q8NGT1 345 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 LRRC29Q8WV35 223 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 CHCHD1Q96BP2 118 aaKnown RBP9.54□□□□□ -0.88
HDAC4-210ENST00000493582 PGLYRP4Q96LB8 373 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 IGKV3D-15A0A087WSY6 115 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 TMEM265A0A087WTH1 108 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 FAM90A9PA6NNJ1 464 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 KLK10O43240 276 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 SP9P0CG40 484 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 PPIAL4GP0DN37 164 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 PET117Q6UWS5 81 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 TMEM108Q6UXF1 575 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 MDP1Q86V88 176 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 NANOS1Q8WY41 292 aaKnown RBP9.54□□□□□ -0.88
HDAC4-210ENST00000493582 C12orf49Q9H741 205 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 OR51B2Q9Y5P1 312 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 PI4KAP42356 2102 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 PRR14LQ5THK1 2151 aa9.54□□□□□ -0.88
HDAC4-210ENST00000493582 TRGV8A0A0C4DH27 118 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 C15orf61A6NNL5 157 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 K7EP34 96 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 SPINT2O43291 252 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 LIPFP07098 398 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 HSPE1P61604 102 aaKnown RBP9.53□□□□□ -0.88
HDAC4-210ENST00000493582 SEC11AP67812 179 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 LEAP2Q969E1 77 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 GTSF1LQ9H1H1 148 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 OBP2BQ9NPH6 170 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 HEATR1Q9H583 2144 aaKnown RBP9.53□□□□□ -0.88
HDAC4-210ENST00000493582 DMDP11532 3685 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 SMPD2O60906 423 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 TNFSF15O95150 251 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 FABP6P51161 128 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 NHLH1Q02575 133 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 LINC00322Q6ZN03 302 aaPredicted RBP9.53□□□□□ -0.88
HDAC4-210ENST00000493582 FAM167A-AS1Q96KT0 104 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 DYSFO75923 2080 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 NCR2O95944 276 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 PLP1P60201 277 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 RPL24P83731 157 aaKnown RBP9.53□□□□□ -0.88
HDAC4-210ENST00000493582 MEF2CQ06413 473 aaPredicted RBP9.53□□□□□ -0.88
HDAC4-210ENST00000493582 FAM162BQ5T6X4 162 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 SPINK14Q6IE38 97 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 GTSF1Q8WW33 167 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 SLC25A2Q9BXI2 301 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 RABAC1Q9UI14 185 aa9.53□□□□□ -0.88
HDAC4-210ENST00000493582 C15orf65H3BRN8 121 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 PEX7O00628 323 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 SMAGPQ0VAQ4 97 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 KIR3DS1Q14943 382 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 C3AR1Q16581 482 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 PERPQ96FX8 193 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 ABI3Q9P2A4 366 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 AZU1P20160 251 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
HDAC4-210ENST00000493582 GUSBP1Q15486 140 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 ATP5L2Q7Z4Y8 100 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 UBALD2Q8IYN6 164 aa9.52□□□□□ -0.89
HDAC4-210ENST00000493582 H3BRM9 83 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 J3QW42 95 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 PLGLB1Q02325 96 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 LINC01545Q5VT33 79 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 ZNF329Q86UD4 541 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 C11orf53Q8IXP5 236 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 NPFFR1Q9GZQ6 430 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 JKAMPQ9P055 326 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 LOXL2Q9Y4K0 774 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 C2CD4DB7Z1M9 353 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 BMI1P35226 326 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 Q0VFX4 171 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 ACP7Q6ZNF0 438 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 C7orf69Q9H7B7 122 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 TMEM14BQ9NUH8 114 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 PLAUP00749 431 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 ADH4P08319 380 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 RTL8BQ17RB0 113 aa9.51□□□□□ -0.89
HDAC4-210ENST00000493582 SPCS1Q9Y6A9 102 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms