RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 IGHV1-69P01742 117 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 SRP19P09132 144 aaKnown RBP2.65□□□□□ -1.99
VPS13A-212ENST00000493341 ZNF14P17017 642 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-212ENST00000493341 CSN1S1P47710 185 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 KRTAP10-6P60371 365 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-212ENST00000493341 HBA1P69905 142 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 WDR59Q6PJI9 974 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 AKAP14Q86UN6 197 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 CAPZA3Q96KX2 299 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 OR8B2Q96RD0 313 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 MIEN1Q9BRT3 115 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 ROBO3Q96MS0 1386 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 A0A1B0GUL6 1792 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 DOCK5Q9H7D0 1870 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 KIF26AQ9ULI4 1882 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-212ENST00000493341 CACNA1DQ01668 2161 aa2.65□□□□□ -1.99
VPS13A-212ENST00000493341 MDFIC2A0A1B0GVS7 189 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 TXNDC9O14530 226 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 TAS2R20P59543 309 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 C12orf74Q32Q52 190 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 PYDC2Q56P42 97 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 SMIM15Q7Z3B0 74 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 SMIM20Q8N5G0 67 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 TRPM7Q96QT4 1865 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 SEC16AO15027 2179 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 ABCC12Q96J65 1359 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 A0A1B0GW54 56 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 CIAO1O76071 339 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 CPSF4O95639 269 aaKnown RBP2.64□□□□□ -1.99
VPS13A-212ENST00000493341 CPMP14384 443 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 ERP29P30040 261 aaKnown RBP2.64□□□□□ -1.99
VPS13A-212ENST00000493341 GNG3P63215 75 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 ZNF117Q03924 483 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 C2orf91Q6ZV80 131 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 GNPDA2Q8TDQ7 276 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 PCBD2Q9H0N5 130 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 EFCAB1Q9HAE3 211 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 FUT9Q9Y231 359 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 HEY1Q9Y5J3 304 aa2.64□□□□□ -1.99
VPS13A-212ENST00000493341 DPRXA6NFQ7 191 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 OR5K4A6NMS3 321 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 NDUFB2O95178 105 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 ZNF682O95780 498 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 KRTAP10-3P60369 221 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 C9orf64Q5T6V5 341 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 GOLT1AQ6ZVE7 132 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 FGF13Q92913 245 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 SS18L2Q9UHA2 77 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 UFC1Q9Y3C8 167 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 SPEF2Q9C093 1822 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 DUOX1Q9NRD9 1551 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 LAMB1P07942 1786 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 A0A1B0GV72 72 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 C8GP07360 202 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 RBP1P09455 135 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 BLVRBP30043 206 aaPredicted RBP2.63□□□□□ -1.99
VPS13A-212ENST00000493341 RBM11P57052 281 aaKnown RBP2.63□□□□□ -1.99
VPS13A-212ENST00000493341 RWDD2BP57060 319 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 HSPE1P61604 102 aaKnown RBP2.63□□□□□ -1.99
VPS13A-212ENST00000493341 FLI1Q01543 452 aaPredicted RBP2.63□□□□□ -1.99
VPS13A-212ENST00000493341 C3orf33Q6P1S2 294 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 OR10D4PQ8NGN7 298 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 OR13C6PQ8NH95 151 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 ZNF675Q8TD23 568 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 GPR119Q8TDV5 335 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 HIGD2AQ9BW72 106 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 IL36BQ9NZH7 164 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 MARCOQ9UEW3 520 aaPredicted RBP2.63□□□□□ -1.99
VPS13A-212ENST00000493341 CYSLTR1Q9Y271 337 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 ZNF609O15014 1411 aa2.63□□□□□ -1.99
VPS13A-212ENST00000493341 ECM29Q5VYK3 1845 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 ARAP2Q8WZ64 1704 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 TRAV9-1A0A075B6T8 112 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 PSCAO43653 123 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 HRES1P13985 223 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 DEFB134Q4QY38 66 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 OR11H6Q8NGC7 330 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 OR5C1Q8NGR4 320 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 DEDD2Q8WXF8 326 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
VPS13A-212ENST00000493341 PYCARDQ9ULZ3 195 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 COL4A5P29400 1685 aa2.62□□□□□ -1.99
VPS13A-212ENST00000493341 LCTP09848 1927 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 TRAPPC13A5PLN9 417 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 CLDN25C9JDP6 229 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 LEPROTO15243 131 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 SULT1A3P0DMM9 295 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 SULT1A4P0DMN0 295 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 FXYD7P58549 80 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 KRTAP13-2Q52LG2 175 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 CLDND2Q8NHS1 167 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 SLC25A40Q8TBP6 338 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 RASSF5Q8WWW0 418 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 GINS3Q9BRX5 216 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 MINOS1-NBL1R4GNA1 71 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 ZNF407Q9C0G0 2248 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 COL4A1P02462 1669 aa2.61□□□□□ -1.99
VPS13A-212ENST00000493341 RTL9Q8NET4 1388 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms