RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TDHQ8IZJ6 230 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 GCNT2Q8N0V5 402 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM256Q8N2U0 113 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CIARTQ8N365 385 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 STXBP6Q8NFX7 210 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OR5B3Q8NH48 314 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A40Q8TBP6 338 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 KLF14Q8TD94 323 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ABHD3Q8WU67 409 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 GATAD1Q8WUU5 269 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM190Q8WZ59 177 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 BORCS7Q96B45 105 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SDSLQ96GA7 329 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CYYR1Q96J86 154 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC35E1Q96K37 410 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM68Q96MH6 324 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 WFIKKN1Q96NZ8 548 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RBM14Q96PK6 669 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CDX2Q99626 313 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 NDFIP1Q9BT67 221 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 DDA1Q9BW61 102 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SFXN3Q9BWM7 321 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SNHG12Q9BXW3 62 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OR2J1Q9GZK6 312 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 FGF23Q9GZV9 251 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 LINC00574Q9H8X3 128 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZDHHC11Q9H8X9 412 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ENY2Q9NPA8 101 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF331Q9NQX6 463 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 DEPPQ9NTK1 212 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 BET1LQ9NYM9 111 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 MRPL27Q9P0M9 148 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 OR1A1Q9P1Q5 309 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A10Q9UBX3 287 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CLN8Q9UBY8 286 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 RNF24Q9Y225 148 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZFP30Q9Y2G7 519 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF257Q9Y2Q1 563 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 KLF13Q9Y2Y9 288 aaPredicted RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 MRPS16Q9Y3D3 137 aaKnown RBP1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 CNTRLQ7Z7A1 2325 aa1.65□□□□□ -2.15
SNRNP40-207ENST00000491106 INTS1Q8N201 2190 aaKnown RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TRGV5A0A0B4J1U4 118 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV39A0A0B4J263 110 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TRGV8A0A0C4DH27 118 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TEX50A0A1B0GTY4 177 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1W2PR80 420 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM27A0A1W2PRY6 76 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 PINLYPA6NC86 204 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM231BA6NCW3 169 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C15orf62A8K5M9 175 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM166BA8MTA8 275 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 A8MWL6 223 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 H3BP45 60 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C15orf65H3BRN8 121 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 J3QR06 171 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 UPK2O00526 184 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 WNT9BO14905 357 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 RAMP3O60896 148 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FCGR3BO75015 233 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FOXH1O75593 365 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IGKV3-15P01624 115 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV3-13P01766 116 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV3-9P01782 118 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHG3P01860 377 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 HLA-DQA1P01909 254 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 APCSP02743 223 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR9G9P0C7N8 305 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 RD3LP0DJH9 198 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C8orf88P0DMB2 117 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SELLP14151 372 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IL3RAP26951 378 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 GCHFRP30047 84 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 MC5RP33032 325 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 GLRXP35754 106 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 WNT5AP41221 380 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 MAGEA5P43359 124 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IER3P46695 156 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 GABRA2P47869 451 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 LGALS7P47929 136 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 GNG4P50150 75 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FABP6P51161 128 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FOXA3P55318 350 aaPredicted RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 EDDM3BP56851 147 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 KLF3P57682 345 aaPredicted RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 MRPS11P82912 194 aaKnown RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF816Q0VGE8 651 aaPredicted RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 KLF5Q13887 457 aaPredicted RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM183BQ1AE95 376 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 CLEC12BQ2HXU8 276 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM30BQ3MIR4 351 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 KRTCAP3Q53RY4 240 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C2orf83Q53S99 150 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C9orf135Q5VTT2 229 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 MIC13Q5XKP0 118 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 ETFRF1Q6IPR1 90 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 WDR82Q6UXN9 313 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 GFRALQ6UXV0 394 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TEX43Q6ZNM6 134 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms