RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CDC42P60953 191 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 LINC00311Q8N616 119 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 MRPL57Q9BQC6 102 aaKnown RBP0.93□□□□□ -2.26
CD46-216ENST00000490278 C22orf24Q9Y442 160 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 RP1P56715 2156 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 ALPK2Q86TB3 2170 aa0.93□□□□□ -2.26
CD46-216ENST00000490278 POLEQ07864 2286 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 MED12LQ86YW9 2145 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 HECW2Q9P2P5 1572 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 CACNA1BQ00975 2339 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 TECTAO75443 2155 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 FAM236DA0A1B0GTK5 79 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 C2orf70A6NJV1 201 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 GOLGA6L19H0YKK7 550 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 KPNA3O00505 521 aaPredicted RBP0.92□□□□□ -2.26
CD46-216ENST00000490278 OR2T1O43869 369 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 OR1I1O60431 355 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 RPP14O95059 124 aaKnown RBP0.92□□□□□ -2.26
CD46-216ENST00000490278 LYPLA2O95372 231 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 RPS17P08708 135 aaKnown RBP0.92□□□□□ -2.26
CD46-216ENST00000490278 RBP1P09455 135 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 FAM236CP0DP71 79 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 MIFP14174 115 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 ITGB3BPQ13352 177 aaPredicted RBP0.92□□□□□ -2.26
CD46-216ENST00000490278 FAM19A2Q8N3H0 131 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 TAS2R4Q9NYW5 299 aa0.92□□□□□ -2.26
CD46-216ENST00000490278 ANAPC1Q9H1A4 1944 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 COL4A5P29400 1685 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 MICAL3Q7RTP6 2002 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 TRAV1-1A0A0B4J248 108 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 OR2B3O76000 313 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 CNIH1O95406 144 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 BAALC-AS2P0C853 105 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 S100A4P26447 101 aaKnown RBP0.91□□□□□ -2.26
CD46-216ENST00000490278 PDE6HQ13956 83 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 TRAPPC6BQ86SZ2 158 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 OOSP2Q86WS3 158 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 KRT222Q8N1A0 295 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 BORCS7Q96B45 105 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 CMSS1Q9BQ75 279 aaKnown RBP0.91□□□□□ -2.26
CD46-216ENST00000490278 CCDC90BQ9GZT6 254 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 OSTCQ9NRP0 149 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 ROBO3Q96MS0 1386 aa0.91□□□□□ -2.26
CD46-216ENST00000490278 DOCK5Q9H7D0 1870 aa0.9□□□□□ -2.26
CD46-216ENST00000490278 A0A087WUJ7 227 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 TRBV6-7A0A0A0MS04 114 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 HYPMO75409 117 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 OR2J2O76002 312 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 UBL3O95164 117 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 SSR2P43308 183 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 RAB4BP61018 213 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 AESQ08117 197 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 IAH1Q2TAA2 248 aaPredicted RBP0.9□□□□□ -2.27
CD46-216ENST00000490278 OR6V1Q8N148 313 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 OR52R1Q8NGF1 315 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 DCSTAMPQ9H295 470 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.9□□□□□ -2.27
CD46-216ENST00000490278 KLK9Q9UKQ9 250 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 PLB1Q6P1J6 1458 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 NEO1Q92859 1461 aa0.9□□□□□ -2.27
CD46-216ENST00000490278 HECW1Q76N89 1606 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 C19orf84I3L1E1 186 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 MGST1P10620 155 aaKnown RBP0.89□□□□□ -2.27
CD46-216ENST00000490278 ZNF93P35789 620 aaPredicted RBP0.89□□□□□ -2.27
CD46-216ENST00000490278 YPEL3P61236 119 aaPredicted RBP0.89□□□□□ -2.27
CD46-216ENST00000490278 RANP62826 216 aaKnown RBP0.89□□□□□ -2.27
CD46-216ENST00000490278 RHOGP84095 191 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 PRB3Q04118 309 aaPredicted RBP0.89□□□□□ -2.27
CD46-216ENST00000490278 EDDM3AQ14507 147 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 RGS21Q2M5E4 152 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 LINC01554Q52M75 96 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 RNASE10Q5GAN6 216 aaKnown RBP0.89□□□□□ -2.27
CD46-216ENST00000490278 GDPD1Q8N9F7 314 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 CT55Q8WUE5 264 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 GPR146Q96CH1 333 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 ROS1P08922 2347 aa0.89□□□□□ -2.27
CD46-216ENST00000490278 IGKV1-9A0A0C4DH69 117 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 hADV38S2A0JD32 116 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 SULT1B1O43704 296 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 TCRBP04435 133 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 CASP1P29466 404 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 LSM6P62312 80 aaKnown RBP0.88□□□□□ -2.27
CD46-216ENST00000490278 C12orf74Q32Q52 190 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 OR13D1Q8NGV5 346 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 PPP1R14BQ96C90 147 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 TRIM4Q9C037 500 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 NHP2Q9NX24 153 aaKnown RBP0.88□□□□□ -2.27
CD46-216ENST00000490278 CYSLTR1Q9Y271 337 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 SLC35A3Q9Y2D2 325 aa0.88□□□□□ -2.27
CD46-216ENST00000490278 hCG_1818297A0A087WSY0 165 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 SMIM9A6NGZ8 99 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 A8MT66 165 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 PROSCO94903 275 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 ZNF682O95780 498 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 OR4E1P0C645 316 aa0.87□□□□□ -2.27
CD46-216ENST00000490278 C12orf45Q8N5I9 185 aaPredicted RBP0.87□□□□□ -2.27
CD46-216ENST00000490278 ZNF418Q8TF45 676 aaPredicted RBP0.87□□□□□ -2.27
CD46-216ENST00000490278 SFT2D1Q8WV19 159 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms