RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PPP5CP53041 499 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 TSPAN5P62079 268 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 C12orf74Q32Q52 190 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 ACTL10Q5JWF8 245 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 TMEM69Q5SWH9 247 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 LPCAT3Q6P1A2 487 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 POM121L12Q8N7R1 296 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 GRAMD2BQ96HH9 432 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 TBC1D24Q9ULP9 559 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 RTL8CO15255 209 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 PRSS3P35030 304 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 SNCAP37840 140 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 P2RY1P47900 373 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 UBE2NLQ5JXB2 153 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 METTL26Q96S19 204 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 SCRT1Q9BWW7 348 aa12.23□□□□□ -0.45
TOP3B-217ENST00000489581 DYNC1H1Q14204 4646 aaKnown RBP12.23□□□□□ -0.45
TOP3B-217ENST00000489581 CRYBB3P26998 211 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 TGFBR1P36897 503 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 MLANAQ16655 118 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 SAMD12Q8N8I0 201 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 TMEM230Q96A57 120 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 MRPL36Q9P0J6 103 aaKnown RBP12.22□□□□□ -0.45
TOP3B-217ENST00000489581 DNAH11Q96DT5 4516 aa12.22□□□□□ -0.45
TOP3B-217ENST00000489581 TMEM127O75204 238 aa12.21□□□□□ -0.45
TOP3B-217ENST00000489581 AMBPP02760 352 aa12.21□□□□□ -0.45
TOP3B-217ENST00000489581 P0DMU3 169 aa12.21□□□□□ -0.45
TOP3B-217ENST00000489581 FAM231AP0DMU4 169 aa12.21□□□□□ -0.45
TOP3B-217ENST00000489581 FAM231CP0DMU5 169 aa12.21□□□□□ -0.45
TOP3B-217ENST00000489581 SLC35G3Q8N808 338 aa12.21□□□□□ -0.45
TOP3B-217ENST00000489581 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
TOP3B-217ENST00000489581 CLN5O75503 358 aa12.2□□□□□ -0.46
TOP3B-217ENST00000489581 IFNA17P01571 189 aa12.2□□□□□ -0.46
TOP3B-217ENST00000489581 RNASE2P10153 161 aaKnown RBP12.2□□□□□ -0.46
TOP3B-217ENST00000489581 DHRS2Q13268 280 aa12.2□□□□□ -0.46
TOP3B-217ENST00000489581 NEDD8Q15843 81 aa12.2□□□□□ -0.46
TOP3B-217ENST00000489581 NARS2Q96I59 477 aaKnown RBP12.2□□□□□ -0.46
TOP3B-217ENST00000489581 RAB40CQ96S21 281 aa12.2□□□□□ -0.46
TOP3B-217ENST00000489581 NDUFAF3Q9BU61 184 aa12.2□□□□□ -0.46
TOP3B-217ENST00000489581 YTHDF1Q9BYJ9 559 aaKnown RBP12.2□□□□□ -0.46
TOP3B-217ENST00000489581 A0A0B4J293 547 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 IGKV1-5P01602 117 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 ETV6P41212 452 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 SUB1P53999 127 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 10.1
TOP3B-217ENST00000489581 UCP3P55916 312 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 TIGITQ495A1 244 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 PSMG4Q5JS54 123 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 CROCCP3Q8IVE0 287 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 OR4X1Q8NH49 305 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 GPX8Q8TED1 209 aa12.19□□□□□ -0.46
TOP3B-217ENST00000489581 PKD1P98161 4303 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 CORTO00230 105 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 IGKV1-17P01599 117 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 NPY1RP25929 384 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 RPS19P39019 145 aaKnown RBP12.18□□□□□ -0.46
TOP3B-217ENST00000489581 OPRK1P41145 380 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 XCL2Q9UBD3 114 aa12.18□□□□□ -0.46
TOP3B-217ENST00000489581 HELTA6NFD8 242 aa12.17□□□□□ -0.46
TOP3B-217ENST00000489581 PGAM2P15259 253 aa12.17□□□□□ -0.46
TOP3B-217ENST00000489581 PI3P19957 117 aa12.17□□□□□ -0.46
TOP3B-217ENST00000489581 HOXA1P49639 335 aaPredicted RBP12.17□□□□□ -0.46
TOP3B-217ENST00000489581 AKR1C2P52895 323 aa12.17□□□□□ -0.46
TOP3B-217ENST00000489581 LGALS9BQ3B8N2 356 aa12.17□□□□□ -0.46
TOP3B-217ENST00000489581 PDCD10Q9BUL8 212 aa12.17□□□□□ -0.46
TOP3B-217ENST00000489581 SCGB2A1O75556 95 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 P0C879 139 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 EIF2B2P49770 351 aaKnown RBP12.16□□□□□ -0.46
TOP3B-217ENST00000489581 KCTD21Q4G0X4 260 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 SNX29P2Q8IUI4 249 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 KRTAP4-5Q9BYR2 181 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 U3KQE9 123 aa12.16□□□□□ -0.46
TOP3B-217ENST00000489581 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 IGLV2-18A0A075B6J9 118 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 M0QYG6 137 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 IFNA10P01566 189 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 RPL5P46777 297 aaKnown RBP12.15□□□□□ -0.46
TOP3B-217ENST00000489581 NUTF2P61970 127 aaKnown RBP12.15□□□□□ -0.46
TOP3B-217ENST00000489581 LSM3P62310 102 aaKnown RBP12.15□□□□□ -0.46
TOP3B-217ENST00000489581 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 C1QTNF4Q9BXJ3 329 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 Q9H521 79 aa12.15□□□□□ -0.46
TOP3B-217ENST00000489581 TRAV30A0A087WSZ9 112 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 IFNA21P01568 189 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
TOP3B-217ENST00000489581 RCVRNP35243 200 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 EMP1P54849 157 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 PIGPP57054 158 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 RND3P61587 244 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
TOP3B-217ENST00000489581 A0A0G2JRQ6 117 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 SMIM31A0A1B0GVY4 71 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 FAM90A26D6RGX4 464 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 H3BMM0 161 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms