RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TEP1Q99973 2627 aaKnown RBP17■□□□□ 0.31
SMC4-221ENST00000489573 TRAV41A0A0B4J266 112 aa17■□□□□ 0.31
SMC4-221ENST00000489573 AGPAT2O15120 278 aa17■□□□□ 0.31
SMC4-221ENST00000489573 RND2P52198 227 aa17■□□□□ 0.31
SMC4-221ENST00000489573 SCGB2A2Q13296 93 aa17■□□□□ 0.31
SMC4-221ENST00000489573 C19orf54Q5BKX5 351 aa17■□□□□ 0.31
SMC4-221ENST00000489573 RBMS3Q6XE24 437 aaKnown RBP17■□□□□ 0.31
SMC4-221ENST00000489573 NPIPB3Q92617 1050 aa17■□□□□ 0.31
SMC4-221ENST00000489573 MRPL36Q9P0J6 103 aaKnown RBP17■□□□□ 0.31
SMC4-221ENST00000489573 IGHV3-21A0A0B4J1V1 117 aa16.99■□□□□ 0.31
SMC4-221ENST00000489573 K7EIM0 57 aa16.99■□□□□ 0.31
SMC4-221ENST00000489573 SOX15O60248 233 aa16.99■□□□□ 0.31
SMC4-221ENST00000489573 HIST1H1BP16401 226 aaKnown RBP16.99■□□□□ 0.31
SMC4-221ENST00000489573 ELLP55199 621 aaPredicted RBP16.99■□□□□ 0.31
SMC4-221ENST00000489573 CXorf58Q96LI9 332 aa16.99■□□□□ 0.31
SMC4-221ENST00000489573 THYN1Q9P016 225 aa16.99■□□□□ 0.31
SMC4-221ENST00000489573 IGKV1OR2-108A0A075B7D4 117 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 CD99P14209 185 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 FOSL1P15407 271 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 BLOC1S1P78537 153 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 KLK9Q2XQG4 91 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 FFAR4Q5NUL3 377 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 ACSM6Q6P461 480 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 DPPA3Q6W0C5 159 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 Q6ZRG5 221 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 Q6ZS46 218 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 TMEM116Q8NCL8 245 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 FAM213BQ8TBF2 198 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 KLK9Q9UKQ9 250 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 AP4M1O00189 453 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 OR10J1P30954 320 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 TMEM41BQ5BJD5 291 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 THAP8Q8NA92 274 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 NPFFR1Q9GZQ6 430 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 LINC00527Q9UJ94 153 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 PXMP4Q9Y6I8 212 aa16.98■□□□□ 0.31
SMC4-221ENST00000489573 LINC00862A6NCI5 91 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 MBP02144 154 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 FHITP49789 147 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 MIC13Q5XKP0 118 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 VSIRQ9H7M9 311 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 ZNF580Q9UK33 172 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 SLC45A2Q9UMX9 530 aa16.97■□□□□ 0.31
SMC4-221ENST00000489573 OR2J3O76001 311 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 TSPAN15O95858 294 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 RPL29P47914 159 aaKnown RBP16.96■□□□□ 0.31
SMC4-221ENST00000489573 PXDC1Q5TGL8 231 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 OR4X1Q8NH49 305 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 DUX5Q96PT3 197 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 RPRMQ9NS64 109 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 ZNF355PQ9NSJ1 428 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 CDC42EP3Q9UKI2 254 aa16.96■□□□□ 0.31
SMC4-221ENST00000489573 ZFP92A6NM28 416 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 NDUFB8O95169 186 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 SRD5A1P18405 259 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 RAB2AP61019 212 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 B2MP61769 119 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 ZNF616Q08AN1 781 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 ACOT6Q3I5F7 207 aaPredicted RBP16.95■□□□□ 0.3
SMC4-221ENST00000489573 STPG3Q8N7X2 389 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 PRSS22Q9GZN4 317 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 FBXL7Q9UJT9 491 aa16.95■□□□□ 0.3
SMC4-221ENST00000489573 IGKV1D-37A0A075B6S9 117 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 PRR20EP86478 221 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 PRR20CP86479 221 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 PRR20DP86480 221 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 PRR20BP86481 221 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 PRR20AP86496 221 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 CYP2G1PQ6ZSU1 146 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 SLC7A5P1Q8MH63 180 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 NOL4LQ96MY1 436 aaPredicted RBP16.94■□□□□ 0.3
SMC4-221ENST00000489573 ACANP16112 2415 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 TRBV9A0A0B4J1U6 114 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 TCRBV4S1A1TA0A5B7 111 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 DNAJC9-AS1A6NH13 148 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 M6PRP20645 277 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 RHOGP84095 191 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 BPIFCQ8NFQ6 507 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 TRGV9Q99603 122 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 SLC39A9Q9NUM3 307 aa16.94■□□□□ 0.3
SMC4-221ENST00000489573 HIVEP1P15822 2718 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 TLN2Q9Y4G6 2542 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 CLN5O75503 358 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 YIF1AO95070 293 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 DEFA5Q01523 94 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 NECAP1Q8NC96 275 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 OR10G4Q8NGN3 311 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 OR10G9Q8NGN4 311 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 OR10G7Q8NGN6 311 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 VN1R17PQ8TDU5 208 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 ZNF702PQ9H963 129 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 MED9Q9NWA0 146 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 PFDN2Q9UHV9 154 aa16.93■□□□□ 0.3
SMC4-221ENST00000489573 MFSD2BA6NFX1 497 aa16.92■□□□□ 0.3
SMC4-221ENST00000489573 H3BUA1 57 aa16.92■□□□□ 0.3
SMC4-221ENST00000489573 LINC00869P0C866 280 aa16.92■□□□□ 0.3
SMC4-221ENST00000489573 PPIFP30405 207 aaKnown RBP16.92■□□□□ 0.3
SMC4-221ENST00000489573 NPBWR1P48145 328 aa16.92■□□□□ 0.3
SMC4-221ENST00000489573 MFAP4P55083 255 aa16.92■□□□□ 0.3
SMC4-221ENST00000489573 TMEM95Q3KNT9 176 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms