RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ZNF207O43670 478 aaKnown RBP11.9□□□□□ -0.5
LMX1A-204ENST00000489443 YIF1AO95070 293 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 OR4E1P0C645 316 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
LMX1A-204ENST00000489443 RELQ04864 619 aaPredicted RBP11.9□□□□□ -0.5
LMX1A-204ENST00000489443 DHRS2Q13268 280 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 GUCA2BQ16661 112 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 DTD1Q8TEA8 209 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 MARC2Q969Z3 335 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
LMX1A-204ENST00000489443 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 MLXQ9UH92 298 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 TMED3Q9Y3Q3 217 aa11.9□□□□□ -0.5
LMX1A-204ENST00000489443 ZNF785A8K8V0 405 aa11.89□□□□□ -0.51
LMX1A-204ENST00000489443 IFNA10P01566 189 aa11.89□□□□□ -0.51
LMX1A-204ENST00000489443 GGNBP1Q5YKI7 109 aa11.89□□□□□ -0.51
LMX1A-204ENST00000489443 BTNL8Q6UX41 500 aa11.89□□□□□ -0.51
LMX1A-204ENST00000489443 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
LMX1A-204ENST00000489443 Q8N1Y9 231 aa11.89□□□□□ -0.51
LMX1A-204ENST00000489443 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
LMX1A-204ENST00000489443 DAZ1Q9NQZ3 744 aaKnown RBP11.89□□□□□ -0.51
LMX1A-204ENST00000489443 MRPL36Q9P0J6 103 aaKnown RBP11.89□□□□□ -0.51
LMX1A-204ENST00000489443 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
LMX1A-204ENST00000489443 PITX3O75364 302 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 TMEM50AO95807 157 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 SLC25A6P12236 298 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 NPY1RP25929 384 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 NOXA1Q86UR1 476 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 COQ8AQ8NI60 647 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 TMEM170AQ8WVE7 144 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 ASCL2Q99929 193 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 C20orf85Q9H1P6 137 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 U3KQ87 197 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 NBEAL2Q6ZNJ1 2754 aa11.88□□□□□ -0.51
LMX1A-204ENST00000489443 TRAV6A0A075B6T7 132 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 RPS10-NUDT3A0A1W2PQS6 291 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 K7EMT4 169 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 ADAP1O75689 374 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
LMX1A-204ENST00000489443 TCRBP04435 133 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 ZNF846Q147U1 533 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 TMEM61Q8N0U2 210 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
LMX1A-204ENST00000489443 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
LMX1A-204ENST00000489443 DNAH9Q9NYC9 4486 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 C15orf62A8K5M9 175 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 CLN5O75503 358 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 IFNA21P01568 189 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 FRMD6-AS1P0C7T7 363 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 IGHV4-30-4P0DP06 118 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 IAPPP10997 89 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 CD81P60033 236 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 MZT2BQ6NZ67 158 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
LMX1A-204ENST00000489443 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 WDR12Q9GZL7 423 aaKnown RBP11.86□□□□□ -0.51
LMX1A-204ENST00000489443 MAGT1Q9H0U3 335 aa11.86□□□□□ -0.51
LMX1A-204ENST00000489443 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 FAM240BA0A1B0GVZ2 78 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 MED6O75586 246 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 IFNA4P05014 189 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 RND2P52198 227 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 PRSS54Q6PEW0 395 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 TOMM20LQ6UXN7 152 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 ZNF600Q6ZNG1 722 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 NUDT15Q9NV35 164 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 SMPXQ9UHP9 88 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 TBC1D24Q9ULP9 559 aa11.85□□□□□ -0.51
LMX1A-204ENST00000489443 PUS1Q9Y606 427 aaKnown RBP eCLIP11.85□□□□□ -0.51
LMX1A-204ENST00000489443 TRAV14DV4A0A0A6YYC5 116 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 MPTX1A8MV57 137 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 SYNGR2O43760 224 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 SCGB2A1O75556 95 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 CD7P09564 240 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
LMX1A-204ENST00000489443 SLC25A4P12235 298 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 TIGITQ495A1 244 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 ETFRF1Q6IPR1 90 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 TMEM116Q8NCL8 245 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 OR10C1Q96KK4 312 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 TUBA4BQ9H853 241 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
LMX1A-204ENST00000489443 STAB2Q8WWQ8 2551 aa11.84□□□□□ -0.51
LMX1A-204ENST00000489443 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 IGHV7-4-1A0A0J9YVY3 117 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 WRBO00258 174 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 UPK1BO75841 260 aa11.83□□□□□ -0.52
LMX1A-204ENST00000489443 IGKV1-17P01599 117 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms