RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 MINOS1Q5TGZ0 78 aa16.17■□□□□ 0.18
NECAB3-213ENST00000488489 CTDSP1Q9GZU7 261 aa16.17■□□□□ 0.18
NECAB3-213ENST00000488489 TIMM9Q9Y5J7 89 aa16.17■□□□□ 0.18
NECAB3-213ENST00000488489 MINOS1-NBL1R4GNA1 71 aa16.17■□□□□ 0.18
NECAB3-213ENST00000488489 SMCO3A2RU48 225 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 FCN1O00602 326 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 ELLP55199 621 aaPredicted RBP16.16■□□□□ 0.18
NECAB3-213ENST00000488489 PAX8Q06710 450 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 C2orf83Q53S99 150 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 ACSM6Q6P461 480 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 MMD2Q8IY49 270 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 FRZBQ92765 325 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 GATCO43716 136 aaKnown RBP16.16■□□□□ 0.18
NECAB3-213ENST00000488489 SSBP2P81877 361 aaPredicted RBP16.16■□□□□ 0.18
NECAB3-213ENST00000488489 OR10D4PQ8NGN7 298 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 ABHD5Q8WTS1 349 aa16.16■□□□□ 0.18
NECAB3-213ENST00000488489 EAF1Q96JC9 268 aaPredicted RBP16.16■□□□□ 0.18
NECAB3-213ENST00000488489 PLA2G2AP14555 144 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 TNXAQ16473 311 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 GPR61Q9BZJ8 451 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 ZANQ9Y493 2812 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 A0A1W2PN81 502 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 PHOX2AO14813 284 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 MOSP00540 346 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 CHRNA7P36544 502 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 ERHP84090 104 aaKnown RBP16.15■□□□□ 0.18
NECAB3-213ENST00000488489 MMDQ15546 238 aa16.15■□□□□ 0.18
NECAB3-213ENST00000488489 ABCA1O95477 2261 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 COMPP49747 757 aaPredicted RBP16.14■□□□□ 0.17
NECAB3-213ENST00000488489 MLANAQ16655 118 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 DNLZQ5SXM8 178 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 GFI1BQ5VTD9 330 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 CCDC144NLQ6NUI1 221 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 CDPF1Q6NVV7 123 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 LINC00469Q8N7U9 141 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 SSX3Q99909 188 aa16.14■□□□□ 0.17
NECAB3-213ENST00000488489 CENPVL3A0A0U1RRI6 287 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 IGLC7A0M8Q6 106 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 OOSP1A8MZH6 123 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 REG1AP05451 166 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 SAA4P35542 130 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 GNB1P62873 340 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 CLEC12BQ2HXU8 276 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 RPP25LQ8N5L8 163 aaKnown RBP16.13■□□□□ 0.17
NECAB3-213ENST00000488489 MGST2Q99735 147 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 NAT8Q9UHE5 227 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 TBL2Q9Y4P3 447 aaKnown RBP16.13■□□□□ 0.17
NECAB3-213ENST00000488489 LSM4Q9Y4Z0 139 aaKnown RBP16.13■□□□□ 0.17
NECAB3-213ENST00000488489 ACTL6BO94805 426 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 APELAP0DMC3 54 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 RPL27AP46776 148 aaKnown RBP16.13■□□□□ 0.17
NECAB3-213ENST00000488489 ATP5IP56385 69 aaPredicted RBP16.13■□□□□ 0.17
NECAB3-213ENST00000488489 HES1Q14469 280 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 CYP2G1PQ6ZSU1 146 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 NPVFQ9HCQ7 196 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 SLC39A9Q9NUM3 307 aa16.13■□□□□ 0.17
NECAB3-213ENST00000488489 NBR2O15453 112 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 DSCR9P59020 149 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 CD81P60033 236 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 MEF2BQ02080 365 aaPredicted RBP16.12■□□□□ 0.17
NECAB3-213ENST00000488489 ZNF709Q8N972 641 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 NPBQ8NG41 125 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 PFDN5Q99471 154 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 RD3LP0DJH9 198 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 PDZD11Q5EBL8 140 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 FFAR4Q5NUL3 377 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.12■□□□□ 0.172e-7■■■□□ 15.4
NECAB3-213ENST00000488489 SMIM7Q9BQ49 75 aa16.12■□□□□ 0.17
NECAB3-213ENST00000488489 NDUFA3O95167 84 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 AREGP15514 252 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 HIST1H1BP16401 226 aaKnown RBP16.11■□□□□ 0.17
NECAB3-213ENST00000488489 PLGLAQ15195 96 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 C9orf152Q5JTZ5 239 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 C19orf35Q6ZS72 473 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 OR2T10Q8NGZ9 312 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 PRDM13Q9H4Q3 707 aa16.11■□□□□ 0.17
NECAB3-213ENST00000488489 TEX22C9J3V5 150 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 MPDU1O75352 247 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 Q8N6K4 173 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 CTXND1A0A1B0GTU2 59 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 C17orf112F2Z3M2 114 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 J3QKU1 62 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 NPFFO15130 113 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 NDUFS6O75380 124 aaKnown RBP16.1■□□□□ 0.17
NECAB3-213ENST00000488489 DEFA4P12838 97 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 EBI3Q14213 229 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 GAMTQ14353 236 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 ADIRFQ15847 76 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 TEPPQ6URK8 271 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 GGTLC1Q9BX51 225 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 SRD5A3Q9H8P0 318 aa16.1■□□□□ 0.17
NECAB3-213ENST00000488489 IGKV1OR2-108A0A075B7D4 117 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 IGHV3OR16-10A0A075B7F0 116 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 TMEM250H0YL14 139 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 MSMBP08118 114 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 CD69Q07108 199 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 TMEM241Q24JQ0 296 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 GCSAMLQ5JQS6 135 aa16.09■□□□□ 0.17
NECAB3-213ENST00000488489 FAM120AOSQ5T036 256 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms