RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 NOTCH3Q9UM47 2321 aa6.07□□□□□ -1.44
NECTIN3-209ENST00000488016 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 TNCP24821 2201 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 TRAV3A0A0B4J244 114 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 TRAV41A0A0B4J266 112 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 C3orf85A0A1B0GTC6 90 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 A0A1W2PN81 502 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 DNASE2O00115 360 aaPredicted RBP6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 SCO1O75880 301 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 CD5P06127 495 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 SAA1P0DJI8 122 aaPredicted RBP6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 VDAC1P21796 283 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 GNRHRP30968 328 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 CHRNA7P36544 502 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 RPL23AP62750 156 aaKnown RBP6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 ZNF266Q14584 549 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 RTL8BQ17RB0 113 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 RNF212Q495C1 297 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 PHLDA2Q53GA4 152 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 SMUG1Q53HV7 270 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 C19orf54Q5BKX5 351 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 ASPHD1Q5U4P2 390 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 BTNL8Q6UX41 500 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 DPPA3Q6W0C5 159 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 NDUFA11Q86Y39 141 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 ZNF695Q8IW36 515 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 GLYATL2Q8WU03 294 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 TMED6Q8WW62 240 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 GNPNAT1Q96EK6 184 aaPredicted RBP6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 RRNAD1Q96FB5 475 aaKnown RBP6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 TMEM56Q96MV1 263 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 GINS3Q9BRX5 216 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 HIPK2Q9H2X6 1198 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 GNB4Q9HAV0 340 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 SMCO4Q9NRQ5 59 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 C11orf21Q9P2W6 132 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 TMEM56-RWDD3S4R434 201 aa6.06□□□□□ -1.44
NECTIN3-209ENST00000488016 E7EUB6 86 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 G3V4G9 280 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 GPR31O00270 319 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 RBMXL2O75526 392 aaKnown RBP6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 S1PR2O95136 353 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 LY86O95711 162 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 PRB2P02812 416 aaPredicted RBP6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 OPN1MWP04001 364 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 IGF1P05019 195 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 OPN1MW2P0DN77 364 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 OPN1MW3P0DN78 364 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 PF4V1P10720 104 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 PPIFP30405 207 aaKnown RBP6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 S100A10P60903 97 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 VAMP2P63027 116 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 BAXQ07812 192 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 FXYD3Q14802 87 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 TNXAQ16473 311 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 FAM74A1Q5RGS3 127 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 TMEM268Q5VZI3 342 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 UNQ5815/PRO19632Q6UWF5 114 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 PPP1R27Q86WC6 154 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 KLHL30-AS1Q8NEE0 82 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 ARPC1AQ92747 370 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 MS4A10Q96PG2 267 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 TMEM222Q9H0R3 208 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 ZMAT4Q9H898 229 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 ZNF430Q9H8G1 570 aaPredicted RBP6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 BIN3Q9NQY0 253 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 SLC2A9Q9NRM0 540 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 OR5AC2Q9NZP5 309 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 MLXQ9UH92 298 aa6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 TSSC4Q9Y5U2 329 aaPredicted RBP6.05□□□□□ -1.44
NECTIN3-209ENST00000488016 A0A1B0GU03 582 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 MED6O75586 246 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 DFFBO76075 338 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 SCAF4O95104 1147 aaKnown RBP6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 CNIH1O95406 144 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 IGHV3-11P01762 117 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 HBE1P02100 147 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 PRH1P02810 166 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 SPP1P10451 314 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 PSMB8P28062 276 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 NKX2-1P43699 371 aaPredicted RBP6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 HOXA1P49639 335 aaPredicted RBP6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 UBE2KP61086 200 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 SLC35B1P78383 322 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 KIAA0141Q14154 515 aaPredicted RBP6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 PRSS8Q16651 343 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 CXorf66Q5JRM2 361 aaPredicted RBP6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 TEX38Q6PEX7 206 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 ZNF66Q6ZN08 573 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 TCTEX1D1Q8N7M0 179 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 C15orf54Q8N8G6 183 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 ZBTB34Q8NCN2 500 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 OR5T1Q8NG75 326 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 OR4S2Q8NH73 311 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 RAX2Q96IS3 184 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 ADTRPQ96IZ2 230 aa6.04□□□□□ -1.44
NECTIN3-209ENST00000488016 RNF5Q99942 180 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms