RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 IGHG4P01861 327 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 ELANEP08246 267 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 CFHR3Q02985 330 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 AKR1C1Q04828 323 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 OPCMLQ14982 345 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 VWC2Q2TAL6 325 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 TMEM95Q3KNT9 176 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 FAM209BQ5JX69 171 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 CENPVQ7Z7K6 275 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 SLC51BQ86UW2 128 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 HAPLN4Q86UW8 402 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 SCGB1C1Q8TD33 95 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 VN1R17PQ8TDU5 208 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 USMG5Q96IX5 58 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 ZNF471Q9BX82 626 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 PARD6GQ9BYG4 376 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 NPVFQ9HCQ7 196 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 SERTAD4Q9NUC0 356 aa8.27□□□□□ -1.09
HLA-DMB-261ENST00000487996 IGLV1-40P01703 118 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TRGV3P03979 118 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 PF4V1P10720 104 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 NPBWR1P48145 328 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 MFAP2P55001 183 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 RHOGP84095 191 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 ARL16Q0P5N6 197 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 FOXE3Q13461 319 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 RAB31Q13636 194 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 UBAC2Q8NBM4 344 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 ATP6V0BQ99437 205 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 FBXL7Q9UJT9 491 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 JMJD1CQ15652 2540 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 A0A1B0GUS0 222 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 UBE2L5PA0A1B0GUS4 154 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 I3L2K1 104 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 SOX15O60248 233 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 OR2J3O76001 311 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 PRH1P02810 166 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TPT1P13693 172 aaKnown RBP8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TPPP2P59282 170 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 GAMTQ14353 236 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 C15orf32Q32M92 178 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 EIF5AL1Q6IS14 154 aaKnown RBP8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TEPPQ6URK8 271 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 C19orf35Q6ZS72 473 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TMEM144Q7Z5S9 345 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TMEM116Q8NCL8 245 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 STOML3Q8TAV4 291 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 EEF1AKMT3Q96AZ1 226 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TXN2Q99757 166 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 KCNIP2Q9NS61 270 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 DMRT1Q9Y5R6 373 aa8.26□□□□□ -1.09
HLA-DMB-261ENST00000487996 TRAV30A0A087WSZ9 112 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 TRBV7-1A0A0A6YYK4 115 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 K7EIM0 57 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 FABP1P07148 127 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 PSMB8P28062 276 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 MFAP4P55083 255 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 ATP5G2Q06055 141 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 ACSM6Q6P461 480 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 ZNF709Q8N972 641 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 OR4X2Q8NGF9 303 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 OR4X1Q8NH49 305 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 GNPNAT1Q96EK6 184 aaPredicted RBP8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 BSCL2Q96G97 398 aaPredicted RBP8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 ACY3Q96HD9 319 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 MS4A10Q96PG2 267 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 FNDC4Q9H6D8 234 aaPredicted RBP8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 C21orf62Q9NYP8 219 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 WDR83OSQ9Y284 106 aa8.25□□□□□ -1.09
HLA-DMB-261ENST00000487996 C17orf112F2Z3M2 114 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 FGF7P21781 194 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 FCGR2BP31994 310 aaPredicted RBP8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 RAB9AP51151 201 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 RND2P52198 227 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 RPL7L1Q6DKI1 246 aaKnown RBP8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 ZNF329Q86UD4 541 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 BAP18Q8IXM2 172 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 KLHDC1Q8N7A1 406 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 LINC01006Q8NI28 216 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 SCARB1Q8WTV0 552 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 WDR61Q9GZS3 305 aaKnown RBP8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 CYTL1Q9NRR1 136 aa8.24□□□□□ -1.09
HLA-DMB-261ENST00000487996 ZFP92A6NM28 416 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 GNG7O60262 68 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 NDUFB8O95169 186 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 LINC01559Q495D7 138 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 BTNL8Q6UX41 500 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 NPIPB3Q92617 1050 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 TAF15Q92804 592 aaKnown RBP eCLIP8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 PHYHIPLQ96FC7 376 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 WFDC1Q9HC57 220 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 CLPSL1A2RUU4 121 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 CLN5O75503 358 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 SELENOTP62341 195 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 Q56UQ5 140 aa8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 LCE2AQ5TA79 106 aaPredicted RBP8.23□□□□□ -1.09
HLA-DMB-261ENST00000487996 THAP8Q8NA92 274 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms