RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 H2BFWTQ7Z2G1 175 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 TMEM231Q9H6L2 316 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 COMMD3Q9UBI1 195 aa14.05□□□□□ -0.16
SMPDL3A-202ENST00000487215 PRSS29PA6NIE9 313 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 KNCNA6PVL3 124 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 K7EQG2 157 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 AMBPP02760 352 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 HSPE1P61604 102 aaKnown RBP14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 ERHP84090 104 aaKnown RBP14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 CENPSQ8N2Z9 138 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 STXBP6Q8NFX7 210 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 CELA1Q9UNI1 258 aa14.04□□□□□ -0.16
SMPDL3A-202ENST00000487215 RTL8CO15255 209 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 ZNF688P0C7X2 276 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 SPINK9Q5DT21 86 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 TBC1D26Q86UD7 250 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 MRGPRFQ96AM1 343 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 GRAMD2BQ96HH9 432 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 CLEC5AQ9NY25 188 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 TBC1D24Q9ULP9 559 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 PKD1P98161 4303 aa14.03□□□□□ -0.16
SMPDL3A-202ENST00000487215 TMEM50AO95807 157 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 NPPCP23582 126 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 C12orf74Q32Q52 190 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 MZT2AQ6P582 158 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 ZNF767PQ75MW2 155 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 SNX29P2Q8IUI4 249 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 POM121L12Q8N7R1 296 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 CSNK1G2-AS1Q8NCQ2 148 aa14.02□□□□□ -0.17
SMPDL3A-202ENST00000487215 DEFB131BA0A096LNP1 70 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 A0A1W2PS18 150 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 P0DMU3 169 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 FAM231AP0DMU4 169 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 FAM231CP0DMU5 169 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 RORCP51449 518 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 ACTL10Q5JWF8 245 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 AP3S1Q92572 193 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 FUNDC2Q9BWH2 189 aa14.01□□□□□ -0.17
SMPDL3A-202ENST00000487215 M0R2N4 97 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 ATG12O94817 140 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 P2RY1P47900 373 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 NCS1P62166 190 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 IZUMO4Q1ZYL8 232 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 DCANP1Q8TF63 244 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 ZNF486Q96H40 463 aaPredicted RBP14□□□□□ -0.17
SMPDL3A-202ENST00000487215 METTL26Q96S19 204 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 SCRT1Q9BWW7 348 aa14□□□□□ -0.17
SMPDL3A-202ENST00000487215 MRPL36Q9P0J6 103 aaKnown RBP14□□□□□ -0.17
SMPDL3A-202ENST00000487215 ELK1P19419 428 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 CRYBB3P26998 211 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 SNCAP37840 140 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 PPP5CP53041 499 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 VBP1P61758 197 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 C15orf40Q8WUR7 153 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 AGRNO00468 2067 aa13.99□□□□□ -0.17
SMPDL3A-202ENST00000487215 FAM25AB3EWG3 89 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 FAM25CB3EWG5 89 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 FAM25GB3EWG6 89 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 HPGDSO60760 199 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 TBPP20226 339 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 RND3P61587 244 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 RNASE10Q5GAN6 216 aaKnown RBP13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 NDUFAF3Q9BU61 184 aa13.98□□□□□ -0.17
SMPDL3A-202ENST00000487215 INS-IGF2F8WCM5 200 aa13.97□□□□□ -0.17
SMPDL3A-202ENST00000487215 CLN5O75503 358 aa13.97□□□□□ -0.17
SMPDL3A-202ENST00000487215 PGAM2P15259 253 aa13.97□□□□□ -0.17
SMPDL3A-202ENST00000487215 ARRDC1Q8N5I2 433 aa13.97□□□□□ -0.17
SMPDL3A-202ENST00000487215 SLC35G3Q8N808 338 aa13.97□□□□□ -0.17
SMPDL3A-202ENST00000487215 FNDC4Q9H6D8 234 aaPredicted RBP13.97□□□□□ -0.17
SMPDL3A-202ENST00000487215 CORTO00230 105 aa13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 IGKV1-5P01602 117 aa13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 RNASE2P10153 161 aaKnown RBP13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 SUB1P53999 127 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 LGALS9BQ3B8N2 356 aa13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 TMEM230Q96A57 120 aa13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 RAB40CQ96S21 281 aa13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 PDCD10Q9BUL8 212 aa13.96□□□□□ -0.17
SMPDL3A-202ENST00000487215 A0A0B4J293 547 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 M0QYG6 137 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 P0C879 139 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 AKR1C2P52895 323 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 PIGPP57054 158 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 MLANAQ16655 118 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 PSMG4Q5JS54 123 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 OR4X1Q8NH49 305 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 ZFAND1Q8TCF1 268 aa13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 NARS2Q96I59 477 aaKnown RBP13.95□□□□□ -0.18
SMPDL3A-202ENST00000487215 SCGB2A1O75556 95 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 B3GALNT1O75752 331 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 IFNA17P01571 189 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 IGKV1-17P01599 117 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 ZNF182P17025 639 aaPredicted RBP13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 OPRK1P41145 380 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 DHRS2Q13268 280 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 CCDC71LQ8N9Z2 235 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 U3KQE9 123 aa13.94□□□□□ -0.18
SMPDL3A-202ENST00000487215 HELTA6NFD8 242 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 NPY1RP25929 384 aa13.93□□□□□ -0.18
SMPDL3A-202ENST00000487215 ETV6P41212 452 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms