RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 PRR20EP86478 221 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 PRR20CP86479 221 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 PRR20DP86480 221 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 PRR20BP86481 221 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 PRR20AP86496 221 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 PEA15Q15121 130 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 AKIRIN2Q53H80 203 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 FBLN7Q53RD9 439 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 MIC13Q5XKP0 118 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 ACSM6Q6P461 480 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 CYP2G1PQ6ZSU1 146 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 STPG3Q8N7X2 389 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 TMEM116Q8NCL8 245 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 OR2T6Q8NHC8 308 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 FAM110DQ8TAY7 271 aaPredicted RBP4.87□□□□□ -1.63
VAMP3-203ENST00000487194 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 RCC1LQ96I51 464 aaKnown RBP4.87□□□□□ -1.63
VAMP3-203ENST00000487194 FAM210AQ96ND0 272 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 RNF2Q99496 336 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 FAM103A1Q9BTL3 118 aaKnown RBP4.87□□□□□ -1.63
VAMP3-203ENST00000487194 FNDC4Q9H6D8 234 aaPredicted RBP4.87□□□□□ -1.63
VAMP3-203ENST00000487194 VSIRQ9H7M9 311 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 MAP1AP78559 2803 aaPredicted RBP4.87□□□□□ -1.63
VAMP3-203ENST00000487194 CSPG4Q6UVK1 2322 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 CSMD2Q7Z408 3487 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 CR1P17927 2039 aa4.87□□□□□ -1.63
VAMP3-203ENST00000487194 ABCA1O95477 2261 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 IGLV11-55A0A075B6I3 123 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TRAV30A0A087WSZ9 112 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 MAP1LC3B2A6NCE7 125 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 ZFP92A6NM28 416 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 SEC14L6B5MCN3 397 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 I3L2K1 104 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 YIF1AO95070 293 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 APELAP0DMC3 54 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 EGR2P11161 476 aaPredicted RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 ZP3P21754 424 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TAGLN2P37802 199 aaKnown RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 NPBWR1P48145 328 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 PPT1P50897 306 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 RND2P52198 227 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 CRIP2P52943 208 aaPredicted RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 RHOBP62745 196 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 NDPQ00604 133 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 ZNF726P1Q15940 193 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 LY6EQ16553 131 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 MLANAQ16655 118 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 GUK1Q16774 197 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 KLK9Q2XQG4 91 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 DEFB112Q30KQ8 113 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TOR2AQ5JU69 321 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 FAM122CQ6P4D5 195 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 SPSB3Q6PJ21 355 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 UNQ5815/PRO19632Q6UWF5 114 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 LCN15Q6UWW0 184 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 RBMS3Q6XE24 437 aaKnown RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TMEM219Q86XT9 240 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 RPP25LQ8N5L8 163 aaKnown RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 BPIFCQ8NFQ6 507 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 OR1L4Q8NGR5 311 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 OR4X1Q8NH49 305 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 RAB24Q969Q5 203 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 ZNF48Q96MX3 618 aaPredicted RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 PFDN5Q99471 154 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TRGV9Q99603 122 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 HSPB9Q9BQS6 159 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TMUB1Q9BVT8 246 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 MAP1LC3BQ9GZQ8 125 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 EIF5A2Q9GZV4 153 aaKnown RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TREM1Q9NP99 234 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 TNFRSF19Q9NS68 423 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 KLK9Q9UKQ9 250 aa4.86□□□□□ -1.63
VAMP3-203ENST00000487194 ANK3Q12955 4377 aaKnown RBP4.86□□□□□ -1.63
VAMP3-203ENST00000487194 NF1P21359 2839 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 IGKV1OR2-108A0A075B7D4 117 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 ELOA3CA0A087WX78 387 aaPredicted RBP4.85□□□□□ -1.63
VAMP3-203ENST00000487194 A0A1B0GV50 99 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 TMEM218A2RU14 115 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 RBFOX3A6NFN3 312 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 K7EIM0 57 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 SMAD7O15105 426 aaKnown RBP4.85□□□□□ -1.63
VAMP3-203ENST00000487194 ATP6V0E1O15342 81 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 CD5LO43866 347 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 CLN5O75503 358 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 IGHG2P01859 326 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 IGF1P05019 195 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 CD5P06127 495 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 LINC00869P0C866 280 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 IER3P46695 156 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 PSMB3P49720 205 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 MFAP4P55083 255 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 TAS2R45P59539 299 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 CCL20P78556 96 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 SCGB2A2Q13296 93 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 ECSCRQ19T08 205 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 KHDC3LQ587J8 217 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 C9orf152Q5JTZ5 239 aa4.85□□□□□ -1.63
VAMP3-203ENST00000487194 Q6YL49 198 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms