RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 LCN15Q6UWW0 184 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 RPP25LQ8N5L8 163 aaKnown RBP5.59□□□□□ -1.51
SF3A3-206ENST00000487062 TEX29Q8N6K0 151 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 BPIFCQ8NFQ6 507 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 ACY3Q96HD9 319 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 TMEM68Q96MH6 324 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 RBM14Q96PK6 669 aaKnown RBP5.59□□□□□ -1.51
SF3A3-206ENST00000487062 RNF2Q99496 336 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 C19orf24Q9BVV8 132 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 THYN1Q9P016 225 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 FBXL7Q9UJT9 491 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 SLC45A2Q9UMX9 530 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 TACC2O95359 2948 aa5.59□□□□□ -1.51
SF3A3-206ENST00000487062 PLXNB1O43157 2135 aa5.59□□□□□ -1.52
SF3A3-206ENST00000487062 CRYBG3Q68DQ2 2970 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 IGHV7-81A0A0B4J1V7 117 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TCRBV4S1A1TA0A5B7 111 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TMEM218A2RU14 115 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 RBFOX3A6NFN3 312 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 ZFP92A6NM28 416 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 SEC14L6B5MCN3 397 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 F8W036 122 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 M0QZK8 103 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 CD5P06127 495 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 FABP1P07148 127 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 CRYGCP07315 174 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 HIST1H1BP16401 226 aaKnown RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TAGLN2P37802 199 aaKnown RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 PPT1P50897 306 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 RND2P52198 227 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 PMS2P11Q13670 270 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 ZNF726P1Q15940 193 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 MLANAQ16655 118 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 KHDC3LQ587J8 217 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 KLF17Q5JT82 389 aaPredicted RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 HIST2H2BCQ6DN03 193 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 RBMS3Q6XE24 437 aaKnown RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 CYP2G1PQ6ZSU1 146 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 C16orf82Q7Z2V1 217 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TTC9CQ8N5M4 171 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 STPG3Q8N7X2 389 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 THAP8Q8NA92 274 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TMEM116Q8NCL8 245 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 MAPK1IP1LQ8NDC0 245 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 OR2T6Q8NHC8 308 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 NANPQ8TBE9 248 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 NPIPB3Q92617 1050 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 RAB24Q969Q5 203 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 LINC00052Q96N35 136 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 PFDN5Q99471 154 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 FAM103A1Q9BTL3 118 aaKnown RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 FNDC4Q9H6D8 234 aaPredicted RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TMEM231Q9H6L2 316 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 SLC25A22Q9H936 323 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 DOPEY2Q9Y3R5 2298 aa5.58□□□□□ -1.52
SF3A3-206ENST00000487062 USP9YO00507 2555 aaPredicted RBP5.58□□□□□ -1.52
SF3A3-206ENST00000487062 TENM4Q6N022 2769 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.57□□□□□ -1.52
SF3A3-206ENST00000487062 LOC105371267A0A1B0GV96 52 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 H3BUX3 64 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 SCGB2A1O75556 95 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 YIF1AO95070 293 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 CXorf1O96002 111 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 LINC00869P0C866 280 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 NPBWR1P48145 328 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 PSMB3P49720 205 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 MFAP2P55001 183 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 CCL20P78556 96 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 HAGHQ16775 308 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 FBLN7Q53RD9 439 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 ZNF506Q5JVG8 444 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 UNQ5815/PRO19632Q6UWF5 114 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 SSX7Q7RTT5 188 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 SLC35E3Q7Z769 313 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 KRTAP1-3Q8IUG1 177 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 C5orf56Q8N8D9 126 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 OR1L4Q8NGR5 311 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 SGMS2Q8NHU3 365 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 FAM110DQ8TAY7 271 aaPredicted RBP5.57□□□□□ -1.52
SF3A3-206ENST00000487062 GATAD1Q8WUU5 269 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 TRGV9Q99603 122 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 FOXC2Q99958 501 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 SEC11CQ9BY50 192 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 MRPL32Q9BYC8 188 aaKnown RBP5.57□□□□□ -1.52
SF3A3-206ENST00000487062 MRPL18Q9H0U6 180 aaKnown RBP5.57□□□□□ -1.52
SF3A3-206ENST00000487062 MANBALQ9NQG1 85 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 TNFRSF19Q9NS68 423 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 GNG13Q9P2W3 67 aa5.57□□□□□ -1.52
SF3A3-206ENST00000487062 MED13LQ71F56 2210 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 SPG11Q96JI7 2443 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 NAV3Q8IVL0 2385 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 IGLV11-55A0A075B6I3 123 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 IGKV1OR2-108A0A075B7D4 117 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 TRAV30A0A087WSZ9 112 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 LOC102723971A0A1B0GUV8 181 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 A6NDX4 124 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 I3L2K1 104 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 LCE2BO14633 110 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 COX7A2P2O60397 106 aa5.56□□□□□ -1.52
SF3A3-206ENST00000487062 APOC3P02656 99 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms