RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TEX29Q8N6K0 151 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 NECAP1Q8NC96 275 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 C5orf30Q96GV9 206 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 PRDM13Q9H4Q3 707 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM140Q9NV12 185 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 DCAF16Q9NXF7 216 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 SLC45A2Q9UMX9 530 aa7.32□□□□□ -1.24
COL12A1-208ENST00000486533 FOXA2Q9Y261 457 aaPredicted RBP7.32□□□□□ -1.24
COL12A1-208ENST00000486533 A0A087X0M5 115 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 A0A1B0GX30 115 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 LINC00473A8K010 186 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 OR9G9P0C7N8 305 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 AREGP15514 252 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 VDAC2P45880 294 aaPredicted RBP7.31□□□□□ -1.24
COL12A1-208ENST00000486533 RPL29P47914 159 aaKnown RBP7.31□□□□□ -1.24
COL12A1-208ENST00000486533 EDDM3BP56851 147 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 HSPE1P61604 102 aaKnown RBP7.31□□□□□ -1.24
COL12A1-208ENST00000486533 POU2AF1Q16633 256 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 C9orf152Q5JTZ5 239 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 FAM78BQ5VT40 261 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 Q6ZR03 302 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 MRPL52Q86TS9 123 aaKnown RBP7.31□□□□□ -1.24
COL12A1-208ENST00000486533 MRPL41Q8IXM3 137 aaKnown RBP7.31□□□□□ -1.24
COL12A1-208ENST00000486533 CD177Q8N6Q3 437 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 BEND2Q8NDZ0 799 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 SLC24A4Q8NFF2 622 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 OR10G8Q8NGN5 311 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 ZNF418Q8TF45 676 aaPredicted RBP7.31□□□□□ -1.24
COL12A1-208ENST00000486533 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 C11orf52Q96A22 123 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 SFRP2Q96HF1 295 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 OR2V2Q96R30 315 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 PCGF1Q9BSM1 259 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 C7orf69Q9H7B7 122 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM106BQ9NUM4 274 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 CALYQ9NYX4 217 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 IL19Q9UHD0 177 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 FUT9Q9Y231 359 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 TCF19Q9Y242 345 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 ZNF257Q9Y2Q1 563 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 TRAPPC1Q9Y5R8 145 aa7.31□□□□□ -1.24
COL12A1-208ENST00000486533 IGHV3-43A0A0B4J1X8 118 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 A0A0U1RQK1 487 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 ZNF320A2RRD8 509 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 NKX6-3A6NJ46 265 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 J3QLI3 93 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 AMBPP02760 352 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 MT-ND6P03923 174 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 IGHV3-43DP0DP04 118 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 IRF2P14316 349 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 GATA3P23771 443 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 PAFAH1B2P68402 229 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 GAMTQ14353 236 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 WDR73Q6P4I2 378 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.3□□□□□ -1.24
COL12A1-208ENST00000486533 GGTLC1Q9BX51 225 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 PLEKHA3Q9HB20 300 aa7.3□□□□□ -1.24
COL12A1-208ENST00000486533 IGHV3-64DA0A0J9YX35 117 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 FOXH1O75593 365 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 NDUFB4O95168 129 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 IL3RAP26951 378 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 GCHFRP30047 84 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 CHRNA7P36544 502 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 BRWD1-AS2P59051 145 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 RANP62826 216 aaKnown RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 GNB1P62873 340 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 GFI1BQ5VTD9 330 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 PQLC2Q6ZP29 291 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM144Q7Z5S9 345 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 PNKDQ8N490 385 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 RFESDQ8TAC1 157 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 MEGF10Q96KG7 1140 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 MRPL32Q9BYC8 188 aaKnown RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 IFI27L2Q9H2X8 130 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 TECRQ9NZ01 308 aaKnown RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 RNF7Q9UBF6 113 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 ANK2Q01484 3957 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 KBTBD11-OT1A0A1B0GTJ5 212 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 APOA2P02652 100 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 IL6RP08887 468 aaPredicted RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 ZFP36P26651 326 aaKnown RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 TPPP2P59282 170 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 UBE2G2P60604 165 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 YPEL3P61236 119 aaPredicted RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 RPEL1Q2QD12 228 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 GBGT1Q8N5D6 347 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM37Q8WXS4 190 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 C22orf15Q8WYQ4 148 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM190Q8WZ59 177 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 MGST2Q99735 147 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 CHRDL1Q9BU40 450 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 NDUFAF3Q9BU61 184 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 GCM1Q9NP62 436 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 TMEM14BQ9NUH8 114 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 IDI2-AS1Q9NZ38 188 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 IL36BQ9NZH7 164 aa7.29□□□□□ -1.24
COL12A1-208ENST00000486533 LSM4Q9Y4Z0 139 aaKnown RBP7.29□□□□□ -1.24
COL12A1-208ENST00000486533 IGKV1D-17A0A075B6S4 117 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms