RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LINC01548A6NM66 108 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 PMS2P5A8MQ11 134 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 OOSP1A8MZH6 123 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 H7C2Y5 167 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 CEACAM3P40198 252 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 HOXA1P49639 335 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 OR2B8PP59922 312 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 DLK1P80370 383 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 PRCDQ00LT1 54 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 VMA21Q3ZAQ7 101 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 TPTE2P1Q5T6R2 138 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 ETV3LQ6ZN32 361 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 SSX9Q7RTT3 188 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 HAPLN4Q86UW8 402 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 TEX45Q8NA69 505 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 TMEM167AQ8TBQ9 72 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 HARBI1Q96MB7 349 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 NOL4LQ96MY1 436 aaPredicted RBP7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 RBM14Q96PK6 669 aaKnown RBP7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 PBDC1Q9BVG4 233 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 KCNIP2Q9NS61 270 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 FBXO7Q9Y3I1 522 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 OR51B2Q9Y5P1 312 aa7.38□□□□□ -1.23
TMEM39A-208ENST00000486159 A0A1W2PN81 502 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 C15orf62A8K5M9 175 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 C17orf112F2Z3M2 114 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 BUB1B-PAK6H3BSN5 160 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 IFNA10P01566 189 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 PF4V1P10720 104 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 MAS1LP35410 378 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 CHRNA7P36544 502 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 ARL16Q0P5N6 197 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 HNF4GQ14541 408 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 PEA15Q15121 130 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 KHDC1LQ5JSQ8 128 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 TMEM182Q6ZP80 229 aaPredicted RBP7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 REC114Q7Z4M0 266 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 THNSL2Q86YJ6 484 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 ZNF709Q8N972 641 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 RPEQ96AT9 228 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 DUX3Q96PT4 197 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 SH3BGRL3Q9H299 93 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 HRH4Q9H3N8 390 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 PLEKHA3Q9HB20 300 aa7.37□□□□□ -1.23
TMEM39A-208ENST00000486159 TMEM218A2RU14 115 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 IGKV1-16P04430 117 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 SNRNP70P08621 437 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 H2AFB1P0C5Y9 115 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 SAA1P0DJI8 122 aaPredicted RBP7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 NPY1RP25929 384 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 SNCAP37840 140 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 RPS16P62249 146 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 RPL8P62917 257 aaKnown RBP7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 ZNF616Q08AN1 781 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 PMS2P11Q13670 270 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 DEFB121Q5J5C9 76 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 OR8G2PQ6IF36 304 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 CCDC144NLQ6NUI1 221 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 LCNL1Q6ZST4 164 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 VKORC1L1Q8N0U8 176 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 SLC24A4Q8NFF2 622 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 BPIFCQ8NFQ6 507 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 FAM213BQ8TBF2 198 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 COMMD5Q9GZQ3 224 aa7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 TSSC4Q9Y5U2 329 aaPredicted RBP7.36□□□□□ -1.23
TMEM39A-208ENST00000486159 IGHV3-72A0A0B4J1Y9 119 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 TRAV3A0A0B4J244 114 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 IGHV1-3A0A0C4DH29 117 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 A0A1W2PPI3 338 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 SRRM4A7MD48 611 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 NDUFS6O75380 124 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 PF4P02776 101 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 CD5P06127 495 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 CD1BP29016 333 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 BRS3P32247 399 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 TAGLN2P37802 199 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 SUB1P53999 127 aaKnown RBP eCLIP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 ERHP84090 104 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 RAB31Q13636 194 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 C2orf83Q53S99 150 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 TMEM41BQ5BJD5 291 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 C10orf91Q5T1B1 145 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 MMD2Q8IY49 270 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 LINC00482Q8N8I6 264 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 MBD3L1Q8WWY6 194 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 LINC00052Q96N35 136 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 SRSF8Q9BRL6 282 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 SEC11CQ9BY50 192 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 KIAA1456Q9P272 454 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 WDR83OSQ9Y284 106 aa7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 CARHSP1Q9Y2V2 147 aaKnown RBP7.35□□□□□ -1.23
TMEM39A-208ENST00000486159 UBE2L5PA0A1B0GUS4 154 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 PRSS46E5RG02 174 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 IGLV2-23P01705 113 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 IFNA4P05014 189 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 M6PRP20645 277 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 FGF7P21781 194 aa7.34□□□□□ -1.23
TMEM39A-208ENST00000486159 REG1BP48304 166 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms