RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ZNF705BP0CI00 300 aaPredicted RBP13.7□□□□□ -0.22
CHRD-216ENST00000486066 NAT1P18440 290 aa13.7□□□□□ -0.22
CHRD-216ENST00000486066 KCTD21Q4G0X4 260 aa13.7□□□□□ -0.22
CHRD-216ENST00000486066 MAPKAPK5-AS1Q8N8E1 139 aa13.7□□□□□ -0.22
CHRD-216ENST00000486066 MYCBP2O75592 4640 aa13.7□□□□□ -0.22
CHRD-216ENST00000486066 VPS13BQ7Z7G8 4022 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 MEIS3P1A6NDR6 274 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 CLEC2LP0C7M8 214 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 NPY1RP25929 384 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 PPP5CP53041 499 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 SOHLH1Q5JUK2 328 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 C1orf134Q5TEV5 83 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 CMTM1Q8IZ96 169 aa13.69□□□□□ -0.22
CHRD-216ENST00000486066 FNDC4Q9H6D8 234 aaPredicted RBP13.69□□□□□ -0.22
CHRD-216ENST00000486066 IGKV1-17P01599 117 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 P0C879 139 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 SDC2P34741 201 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 TNP2Q05952 138 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 Q8N1X5 172 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 METTL26Q96S19 204 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 C1QTNF4Q9BXJ3 329 aa13.68□□□□□ -0.22
CHRD-216ENST00000486066 H3BMM0 161 aa13.67□□□□□ -0.22
CHRD-216ENST00000486066 CLN5O75503 358 aa13.67□□□□□ -0.22
CHRD-216ENST00000486066 IFNA21P01568 189 aa13.67□□□□□ -0.22
CHRD-216ENST00000486066 IFNA17P01571 189 aa13.67□□□□□ -0.22
CHRD-216ENST00000486066 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
CHRD-216ENST00000486066 OR4A16Q8NH70 328 aa13.67□□□□□ -0.22
CHRD-216ENST00000486066 SEPSECSQ9HD40 501 aaKnown RBP13.67□□□□□ -0.22
CHRD-216ENST00000486066 XCL2Q9UBD3 114 aa13.67□□□□□ -0.22
CHRD-216ENST00000486066 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 SPART-AS1P0CW21 52 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 RNASE2P10153 161 aaKnown RBP13.66□□□□□ -0.22
CHRD-216ENST00000486066 PSMG4Q5JS54 123 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 H2BFWTQ7Z2G1 175 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 UBE2DNLQ8IWF7 75 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 TSPAN14Q8NG11 270 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 OR4X1Q8NH49 305 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 DKK2Q9UBU2 259 aa13.66□□□□□ -0.22
CHRD-216ENST00000486066 HELTA6NFD8 242 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 OXA1LQ15070 435 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 BSXQ3C1V8 233 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 C16orf54Q6UWD8 224 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 MRGPRFQ96AM1 343 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 RNF167Q9H6Y7 350 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 DIABLOQ9NR28 239 aa13.65□□□□□ -0.22
CHRD-216ENST00000486066 DMBT1Q9UGM3 2413 aaPredicted RBP13.64□□□□□ -0.23
CHRD-216ENST00000486066 TMEM189A5PLL7 270 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 FAM90A26D6RGX4 464 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 PMP2P02689 132 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
CHRD-216ENST00000486066 DHRS2Q13268 280 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 MLANAQ16655 118 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 IZUMO4Q1ZYL8 232 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 PHLDA2Q53GA4 152 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 SPINK9Q5DT21 86 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 TBC1D26Q86UD7 250 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 BLOC1S6Q9UL45 172 aa13.64□□□□□ -0.23
CHRD-216ENST00000486066 A0A0B4J293 547 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 SMIM9A6NGZ8 99 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 CORTO00230 105 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 HLA-DRB4P13762 266 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 GABARAPL2P60520 117 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 NUTF2P61970 127 aaKnown RBP13.63□□□□□ -0.23
CHRD-216ENST00000486066 MXD1Q05195 221 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 IDNKQ5T6J7 187 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 OR6F1Q8NGZ6 308 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 IFT46Q9NQC8 304 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 HLA-DRB4X5D2U9 266 aa13.63□□□□□ -0.23
CHRD-216ENST00000486066 IGKV1-5P01602 117 aa13.62□□□□□ -0.23
CHRD-216ENST00000486066 FAM3BP58499 235 aaPredicted RBP13.62□□□□□ -0.23
CHRD-216ENST00000486066 TAS2R46P59540 309 aa13.62□□□□□ -0.23
CHRD-216ENST00000486066 SPARTQ8N0X7 666 aa13.62□□□□□ -0.23
CHRD-216ENST00000486066 SSR3Q9UNL2 185 aa13.62□□□□□ -0.23
CHRD-216ENST00000486066 SNCAP37840 140 aa13.61□□□□□ -0.23
CHRD-216ENST00000486066 TIGITQ495A1 244 aa13.61□□□□□ -0.23
CHRD-216ENST00000486066 FAM222AQ5U5X8 452 aa13.61□□□□□ -0.23
CHRD-216ENST00000486066 ZNF709Q8N972 641 aa13.61□□□□□ -0.23
CHRD-216ENST00000486066 OR5H2Q8NGV7 314 aa13.61□□□□□ -0.23
CHRD-216ENST00000486066 NIPSNAP3BQ9BS92 247 aa13.61□□□□□ -0.23
CHRD-216ENST00000486066 TMEM127O75204 238 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 IGLC1P0CG04 106 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 PSMB9P28065 219 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 HRH1P35367 487 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 AP2S1P53680 142 aaPredicted RBP13.6□□□□□ -0.23
CHRD-216ENST00000486066 UCP3P55916 312 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 GDF5OSQ5U4N7 250 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 CLUHP3Q96NS8 147 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 NRN1Q9NPD7 142 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 RFNGQ9Y644 331 aa13.6□□□□□ -0.23
CHRD-216ENST00000486066 TEX48A0A1B0GUV7 120 aa13.59□□□□□ -0.23
CHRD-216ENST00000486066 NKX2-1P43699 371 aaPredicted RBP13.59□□□□□ -0.23
CHRD-216ENST00000486066 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
CHRD-216ENST00000486066 TMEM88Q6PEY1 159 aa13.59□□□□□ -0.23
CHRD-216ENST00000486066 TMEM230Q96A57 120 aa13.59□□□□□ -0.23
CHRD-216ENST00000486066 NARS2Q96I59 477 aaKnown RBP13.59□□□□□ -0.23
CHRD-216ENST00000486066 CNBD2Q96M20 576 aa13.59□□□□□ -0.23
CHRD-216ENST00000486066 BUB3O43684 328 aa13.58□□□□□ -0.24
CHRD-216ENST00000486066 HNRNPCP07910 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms