RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 OR52B4Q8NGK2 314 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 RBKSQ9H477 322 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 ZMAT4Q9H898 229 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 U3KQK5 164 aa9.45□□□□□ -0.9
PTCD1-205ENST00000485746 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 K7EMT4 169 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 NDUFB6O95139 128 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 TMEM50AO95807 157 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 HOXB5P09067 269 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 C8orf88P0DMB2 117 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 TNFRSF9Q07011 255 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 AARDQ4LEZ3 155 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 C2orf83Q53S99 150 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 NMSQ5H8A3 153 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 SBSPONQ8IVN8 264 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 SLC24A4Q8NFF2 622 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 DTD1Q8TEA8 209 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 SDHCQ99643 169 aaPredicted RBP9.44□□□□□ -0.9
PTCD1-205ENST00000485746 GINS3Q9BRX5 216 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 PAIP2BQ9ULR5 123 aaKnown RBP9.44□□□□□ -0.9
PTCD1-205ENST00000485746 FLVCR2Q9UPI3 526 aa9.44□□□□□ -0.9
PTCD1-205ENST00000485746 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
PTCD1-205ENST00000485746 TRAV14DV4A0A0A6YYC5 116 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 OR11H12B2RN74 326 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 IFNA4P05014 189 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 CD7P09564 240 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 NPY1RP25929 384 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 BMI1P35226 326 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 UBE2MP61081 183 aaKnown RBP9.43□□□□□ -0.9
PTCD1-205ENST00000485746 MLANAQ16655 118 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 C4orf46Q504U0 113 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 ZNF600Q6ZNG1 722 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 TMEM116Q8NCL8 245 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 COQ8AQ8NI60 647 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 RNASEH2CQ8TDP1 164 aaKnown RBP9.43□□□□□ -0.9
PTCD1-205ENST00000485746 TMED3Q9Y3Q3 217 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 U3KQ87 197 aa9.43□□□□□ -0.9
PTCD1-205ENST00000485746 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 IGHV3-49A0A0A0MS15 119 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 C9orf170A2RU37 121 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 CLN5O75503 358 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 MED6O75586 246 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 IFNA21P01568 189 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 SLC25A4P12235 298 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 CNPY1Q3B7I2 92 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 PVRIGQ6DKI7 326 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 DEFB125Q8N687 156 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 LRTM2Q8N967 370 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 OR4X1Q8NH49 305 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 S100ZQ8WXG8 99 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 FNDC4Q9H6D8 234 aaPredicted RBP9.42□□□□□ -0.9
PTCD1-205ENST00000485746 SRD5A3Q9H8P0 318 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 HSPB7Q9UBY9 170 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 SMPXQ9UHP9 88 aa9.42□□□□□ -0.9
PTCD1-205ENST00000485746 IGHV7-4-1A0A0J9YVY3 117 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 A8MZ25 164 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 LYRM1O43325 122 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 OR4E1P0C645 316 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 IAPPP10997 89 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 SLC25A6P12236 298 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 ANXA7P20073 488 aaKnown RBP9.41□□□□□ -0.9
PTCD1-205ENST00000485746 RND2P52198 227 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 RAB11AP62491 216 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
PTCD1-205ENST00000485746 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 GGNBP1Q5YKI7 109 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 TOMM20LQ6UXN7 152 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 NARS2Q96I59 477 aaKnown RBP9.41□□□□□ -0.9
PTCD1-205ENST00000485746 CCDC32Q9BV29 185 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 RHPN1-AS1Q9BWJ2 59 aa9.41□□□□□ -0.9
PTCD1-205ENST00000485746 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTCD1-205ENST00000485746 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 IGHV3OR16-13A0A075B7E8 117 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 IGHV3-74A0A0B4J1X5 117 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 NPPCP23582 126 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 OR10J1P30954 320 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 RPL11P62913 178 aaKnown RBP9.4□□□□□ -0.9
PTCD1-205ENST00000485746 TIGITQ495A1 244 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 LYG2Q86SG7 212 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 OR1S2Q8NGQ3 325 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 Q8WTZ3 238 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 WWC2-AS2Q96NR7 200 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 RCHY1Q96PM5 261 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
PTCD1-205ENST00000485746 TMEM231Q9H6L2 316 aa9.4□□□□□ -0.9
PTCD1-205ENST00000485746 TGP01266 2768 aa9.4□□□□□ -0.91
PTCD1-205ENST00000485746 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 A0A1W2PS18 150 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 A6NHS1 94 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 FAM90A26D6RGX4 464 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 WRBO00258 174 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 CHEK1O14757 476 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 TSPAN4O14817 238 aa9.39□□□□□ -0.91
PTCD1-205ENST00000485746 TFPI2P48307 235 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms