RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 ARRDC1Q8N5I2 433 aa10.03□□□□□ -0.8
SMARCD3-211ENST00000485592 HRH4Q9H3N8 390 aa10.03□□□□□ -0.8
SMARCD3-211ENST00000485592 RABL2AQ9UBK7 228 aaPredicted RBP10.03□□□□□ -0.8
SMARCD3-211ENST00000485592 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
SMARCD3-211ENST00000485592 HECTD4Q9Y4D8 3996 aa10.03□□□□□ -0.8
SMARCD3-211ENST00000485592 I3L2K1 104 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 MT-CO2P00403 227 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 ETV6P41212 452 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 UCP3P55916 312 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 TMEM41BQ5BJD5 291 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 LEMD1Q68G75 181 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 STEAP1BQ6NZ63 245 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 OR4C16Q8NGL9 310 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 ZNF414Q96IQ9 312 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 TMEM14BQ9NUH8 114 aa10.02□□□□□ -0.81
SMARCD3-211ENST00000485592 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 ANKRD20A5PA0PJZ0 165 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 GPR31O00270 319 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 RAB3DO95716 219 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 S100GP29377 79 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 PPP5CP53041 499 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 TSPAN5P62079 268 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 PHLDA2Q53GA4 152 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 Q8NAQ8 132 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 DUSP18Q8NEJ0 188 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 ST8SIA2Q92186 375 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 TMEM231Q9H6L2 316 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 VSIRQ9H7M9 311 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 NDUFA13Q9P0J0 144 aa10.01□□□□□ -0.81
SMARCD3-211ENST00000485592 TRAV10A0A0B4J240 114 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 A6NHS1 94 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 DBX1A6NMT0 343 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 IGHV3-48P01763 117 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 MIFP14174 115 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 NPBWR1P48145 328 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 KLF9Q13886 244 aaPredicted RBP10□□□□□ -0.81
SMARCD3-211ENST00000485592 TOMM20LQ6UXN7 152 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 OR13C8Q8NGS7 320 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 OR4A16Q8NH70 328 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 SRRQ9GZT4 340 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 RABAC1Q9UI14 185 aa10□□□□□ -0.81
SMARCD3-211ENST00000485592 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 IGHV4-4A0A075B6R2 117 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 IGHV4-28A0A0C4DH34 117 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 IGHV3-66A0A0C4DH42 116 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 AKAIN1P0CW23 69 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 SPP1P10451 314 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 PI3P19957 117 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 HLA-DMBP28068 263 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 S100A5P33763 92 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 ERHP84090 104 aaKnown RBP9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 PRCDQ00LT1 54 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 MORN3Q6PF18 240 aaPredicted RBP9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 ZNF600Q6ZNG1 722 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 H2BFWTQ7Z2G1 175 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 TBC1D26Q86UD7 250 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 TERB2Q8NHR7 220 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 SDHCQ99643 169 aaPredicted RBP9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 FAM212BQ9NTI7 297 aaPredicted RBP9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 DNAH6Q9C0G6 4158 aa9.99□□□□□ -0.81
SMARCD3-211ENST00000485592 IGKV1-39P01597 117 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 APOHP02749 345 aaPredicted RBP9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 IGKV1D-39P04432 117 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 RBMY1A1P0DJD3 496 aaKnown RBP9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 RBMY1CP0DJD4 496 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 RND3P61587 244 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 MEF2DQ14814 521 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 RBMY1FQ15415 496 aaKnown RBP9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 PYDC2Q56P42 97 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 PVRIGQ6DKI7 326 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 Q6ZTC4 211 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 FAM24BQ8N5W8 94 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 PUS1Q9Y606 427 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCD3-211ENST00000485592 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 A0A1W2PS18 150 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 HSPE1P61604 102 aaKnown RBP9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 LPCAT3Q6P1A2 487 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 LILRB2Q8N423 598 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 OR51S1Q8NGJ8 323 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 MARCH1Q8TCQ1 289 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 ZNF486Q96H40 463 aaPredicted RBP9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 SEC22AQ96IW7 307 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 RNF126Q9BV68 326 aa9.97□□□□□ -0.81
SMARCD3-211ENST00000485592 ZNF705EA8MWA4 302 aaPredicted RBP9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 NPPCP23582 126 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 SNCAP37840 140 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 PIGPP57054 158 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 BAK1Q16611 211 aa9.96□□□□□ -0.82
SMARCD3-211ENST00000485592 CNPY1Q3B7I2 92 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms