RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ARPC1AQ92747 370 aa13.27□□□□□ -0.29
CTSA-207ENST00000484855 CSMD2Q7Z408 3487 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 CTRB1P17538 263 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 TAGLN2P37802 199 aaKnown RBP13.26□□□□□ -0.29
CTSA-207ENST00000484855 CX3CL1P78423 397 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 TMEM249Q2WGJ8 235 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 CTRB2Q6GPI1 263 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 WNT10AQ9GZT5 417 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 SEPSECSQ9HD40 501 aaKnown RBP13.26□□□□□ -0.29
CTSA-207ENST00000484855 DMRT1Q9Y5R6 373 aa13.26□□□□□ -0.29
CTSA-207ENST00000484855 IGHV3-21A0A0B4J1V1 117 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 CXorf1O96002 111 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 MT-CO2P00403 227 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 ARL14EPLP0DKL9 152 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 SPATA31B1PQ5VZV4 182 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 BRD3OSQ6XYD6 125 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 GATAD1Q8WUU5 269 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 C7orf69Q9H7B7 122 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
CTSA-207ENST00000484855 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 TCRBV4S1A1TA0A5B7 111 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 NDPQ00604 133 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
CTSA-207ENST00000484855 FAM74A3Q4VXF1 159 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 FAM78BQ5VT40 261 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 Q8N9W7 124 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 SUN5Q8TC36 379 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 HIF1ANQ9NWT6 349 aa13.25□□□□□ -0.29
CTSA-207ENST00000484855 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
CTSA-207ENST00000484855 DNASE2O00115 360 aaPredicted RBP13.24□□□□□ -0.29
CTSA-207ENST00000484855 AKIRIN2Q53H80 203 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 SPNS3Q6ZMD2 512 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 BEX4Q9NWD9 120 aaPredicted RBP13.24□□□□□ -0.29
CTSA-207ENST00000484855 TRAV20A0A0B4J274 112 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 J3QKU1 62 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 M0R036 132 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 NUPL2O15504 423 aaKnown RBP13.24□□□□□ -0.29
CTSA-207ENST00000484855 TSPAN9O75954 239 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 IGHV4-38-2P0DP08 117 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 ZNF90Q03938 601 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 AWAT1Q58HT5 328 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 TMEM116Q8NCL8 245 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 FUT9Q9Y231 359 aa13.24□□□□□ -0.29
CTSA-207ENST00000484855 PUS1Q9Y606 427 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTSA-207ENST00000484855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.23□□□□□ -0.294e-7■■■□□ 14.7
CTSA-207ENST00000484855 A0A096LNT2 108 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 PAGE4O60829 102 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 CD81P60033 236 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 SELENOTP62341 195 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 FAM90A2PQ658T7 463 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 MIR17HGQ75NE6 70 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 NANPQ8TBE9 248 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 C19orf24Q9BVV8 132 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 CENPEQ02224 2701 aa13.23□□□□□ -0.29
CTSA-207ENST00000484855 HLA-DRB1P01911 266 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 OR5G3P0C626 314 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 GATA3P23771 443 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 DEFB113Q30KQ7 82 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 TNFRSF19Q9NS68 423 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 IGHV7-81A0A0B4J1V7 117 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 I3L2K1 104 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 ASPHD1Q5U4P2 390 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 TRGV9Q99603 122 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 NIPSNAP3BQ9BS92 247 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 CSMD1Q96PZ7 3565 aa13.22□□□□□ -0.29
CTSA-207ENST00000484855 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
CTSA-207ENST00000484855 TENM4Q6N022 2769 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 H3BQ15 152 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 GCHFRP30047 84 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 UBE2G2P60604 165 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 CBLN2Q8IUK8 224 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 OR4F4Q96R69 305 aa13.21□□□□□ -0.29
CTSA-207ENST00000484855 PSMB11A5LHX3 300 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 C11orf94C9JXX5 98 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 BPIFB3P59826 476 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 LRRC75A-AS1Q8N1F1 130 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 OR1L4Q8NGR5 311 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 TMEM37Q8WXS4 190 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 MRPL32Q9BYC8 188 aaKnown RBP13.21□□□□□ -0.3
CTSA-207ENST00000484855 RPS10P5Q9NQ39 176 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 POLQO75417 2590 aa13.21□□□□□ -0.3
CTSA-207ENST00000484855 ZFHX3Q15911 3703 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 COX7A2P2O60397 106 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 PFDN5Q99471 154 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 RNF2Q99496 336 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
CTSA-207ENST00000484855 DNAJC4Q9NNZ3 241 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms