RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 TRAV14DV4A0A0A6YYC5 116 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 AKAIN1P0CW23 69 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PGAM2P15259 253 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ETV6P41212 452 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 INPP1P49441 399 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 UCP3P55916 312 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 HSPE1P61604 102 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ERHP84090 104 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 STEAP1BQ6NZ63 245 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 GBGT1Q8N5D6 347 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 FBXL17Q9UF56 701 aa11.26□□□□□ -0.61
HLA-DQB1-208ENST00000484729 MPTX1A8MV57 137 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 AKR1C2P52895 323 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 MEF2DQ14814 521 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 IZUMO4Q1ZYL8 232 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TRIQKQ629K1 86 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TCF24Q7RTU0 167 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ARRDC1Q8N5I2 433 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 SLC35G3Q8N808 338 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 SRRQ9GZT4 340 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 CSTL1Q9H114 145 aa11.25□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ANKRD20A5PA0PJZ0 165 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 CD74P04233 296 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PI3P19957 117 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PPP5CP53041 499 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 AP3S2P59780 193 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 SCGB2B2Q4G0G5 96 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TOMM5Q8N4H5 51 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 DUSP18Q8NEJ0 188 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 OR4C16Q8NGL9 310 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TRIM63Q969Q1 353 aa11.24□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ABCA13Q86UQ4 5058 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 MUC4Q99102 2169 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 IFNA17P01571 189 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 MED14OSP0DP75 135 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 SNCAP37840 140 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 NPBWR1P48145 328 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PIGPP57054 158 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 FAM90A2PQ658T7 463 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TOMM20LQ6UXN7 152 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ST8SIA2Q92186 375 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 MCUBQ9NWR8 336 aa11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
HLA-DQB1-208ENST00000484729 A0A1B0GVY2 172 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 IFNA4P05014 189 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 HOXA1P49639 335 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 RND3P61587 244 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 RPL11P62913 178 aaKnown RBP11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 RBMS2Q15434 407 aaKnown RBP11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ZNF486Q96H40 463 aaPredicted RBP11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 RARRES2Q99969 163 aa11.22□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PKHD1P08F94 4074 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ATG12O94817 140 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 CA1P00915 261 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 APOHP02749 345 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 CD5P06127 495 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 KLF9Q13886 244 aaPredicted RBP11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 LINC00299Q6ZSB3 139 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 C2CD4CQ8TF44 421 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 PRRT1Q99946 306 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 VSIRQ9H7M9 311 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
HLA-DQB1-208ENST00000484729 A0A0B4J293 547 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 CORTO00230 105 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 DFFBO76075 338 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 SUB1P53999 127 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 DEFB131AP59861 70 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 LEMD1Q68G75 181 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 CCDC71LQ8N9Z2 235 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 OR51S1Q8NGJ8 323 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 COPZ2Q9P299 210 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 SCP2D1Q9UJQ7 156 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
HLA-DQB1-208ENST00000484729 A0A1B0GU03 582 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms