RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 UNC13CQ8NB66 2214 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 SPTAN1Q13813 2472 aaKnown RBP3.67□□□□□ -1.82
UBR3-210ENST00000484596 IGHV3OR16-8A0A075B7F1 116 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 A0A1B0GV90 55 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 EXOC1LA0A1B0GW35 172 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 OR4C46A6NHA9 309 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 IGLL5B9A064 214 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 TMEM250H0YL14 139 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.67□□□□□ -1.82
UBR3-210ENST00000484596 K7EM74 188 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 KPNA4O00629 521 aaPredicted RBP3.67□□□□□ -1.82
UBR3-210ENST00000484596 CRYZL1O95825 349 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 IGLV3-27P01718 113 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 CRYGDP07320 174 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 CNTFRP26992 372 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 MP68P56378 58 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 TSNQ15631 228 aaKnown RBP3.67□□□□□ -1.82
UBR3-210ENST00000484596 FAM19A3Q7Z5A8 133 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 EIF4E3Q8N5X7 224 aaKnown RBP3.67□□□□□ -1.82
UBR3-210ENST00000484596 OR10A6Q8NH74 314 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 CHST5Q9GZS9 411 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 TMEM138Q9NPI0 162 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 BIN3Q9NQY0 253 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 LSM5Q9Y4Y9 91 aaKnown RBP3.67□□□□□ -1.82
UBR3-210ENST00000484596 ASB4Q9Y574 426 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 OTOGQ6ZRI0 2925 aa3.67□□□□□ -1.82
UBR3-210ENST00000484596 IGHV1-45A0A0A0MS14 117 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 IGHV3-43A0A0B4J1X8 118 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 RFPL4AA6NLU0 287 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 RFPL4AL1F8VTS6 287 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 K7ERS5 55 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 OR7C1O76099 320 aaPredicted RBP3.66□□□□□ -1.82
UBR3-210ENST00000484596 SERPINA7P05543 415 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 PTHLHP12272 177 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 MYL12AP19105 171 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 RAB2AP61019 212 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 ENDOGQ14249 297 aaKnown RBP3.66□□□□□ -1.82
UBR3-210ENST00000484596 CDK10Q15131 360 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 CALHM3Q86XJ0 350 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 AMN1Q8IY45 258 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 ZNF567Q8N184 647 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 GRPEL2Q8TAA5 225 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 KCTD4Q8WVF5 259 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 LZICQ8WZA0 190 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 CMSS1Q9BQ75 279 aaKnown RBP3.66□□□□□ -1.82
UBR3-210ENST00000484596 GINS3Q9BRX5 216 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 NMNAT1Q9HAN9 279 aaPredicted RBP3.66□□□□□ -1.82
UBR3-210ENST00000484596 POLR1DQ9Y2S0 133 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 NUBP2Q9Y5Y2 271 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 U3KQA8 63 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 NBASA2RRP1 2371 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 PDZD2O15018 2839 aa3.66□□□□□ -1.82
UBR3-210ENST00000484596 IGSF23A1L1A6 192 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 PRORSD1PA6NEY8 169 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 STK16O75716 305 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 POP7O75817 140 aaKnown RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 MT-CO2P00403 227 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 IL3P08700 152 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 S100A2P29034 98 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 S100GP29377 79 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 RAB5BP61020 215 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 SNRPFP62306 86 aaKnown RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 SLC35A2P78381 396 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 SURF2Q15527 256 aaPredicted RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 ACOT6Q3I5F7 207 aaPredicted RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 KPRPQ5T749 579 aaPredicted RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 NAA40Q86UY6 237 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 SGPP2Q8IWX5 399 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 OR8J3Q8NGG0 315 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 OR10D3Q8NH80 312 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 RNASE11Q8TAA1 199 aaKnown RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 BTF3L4Q96K17 158 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 PFDN5Q99471 154 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 DOK5Q9P104 306 aa3.65□□□□□ -1.83
UBR3-210ENST00000484596 TNRC6AQ8NDV7 1962 aaKnown RBP3.65□□□□□ -1.83
UBR3-210ENST00000484596 ANK3Q12955 4377 aaKnown RBP3.64□□□□□ -1.83
UBR3-210ENST00000484596 TEP1Q99973 2627 aaKnown RBP3.64□□□□□ -1.83
UBR3-210ENST00000484596 APCP25054 2843 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 SHANK1Q9Y566 2161 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 IGHV3-21A0A0B4J1V1 117 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 PVALEFA0A1B0GWK0 134 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 LEUTXA8MZ59 168 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 F5H5P2 479 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 MFSD11O43934 449 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 ATG12O94817 140 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 PFN1P07737 140 aaKnown RBP3.64□□□□□ -1.83
UBR3-210ENST00000484596 HIST1H1TP22492 207 aaPredicted RBP3.64□□□□□ -1.83
UBR3-210ENST00000484596 MIPP30301 263 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 OR1E2P47887 323 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 SRP9P49458 86 aaKnown RBP3.64□□□□□ -1.83
UBR3-210ENST00000484596 IHHQ14623 411 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 DNLZQ5SXM8 178 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 C9orf64Q5T6V5 341 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 HES3Q5TGS1 186 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 LAIR2Q6ISS4 152 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
UBR3-210ENST00000484596 SPNS3Q6ZMD2 512 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms