RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 OR52R1Q8NGF1 315 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 DNAJC9Q8WXX5 260 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 TMEM70Q9BUB7 260 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 SSR3Q9UNL2 185 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 AMMECR1Q9Y4X0 333 aaPredicted RBP2.16□□□□□ -2.06
VPS13A-211ENST00000484581 MIA2Q96PC5 1412 aa2.16□□□□□ -2.06
VPS13A-211ENST00000484581 TRGV4A0A0C4DH28 118 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 A0A0D9SEW6 157 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 MFSD11O43934 449 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 IDO1P14902 403 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 SRIP30626 198 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 SERPINB1P30740 379 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 EIF2B2P49770 351 aaKnown RBP2.15□□□□□ -2.07
VPS13A-211ENST00000484581 TMEM258P61165 79 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 RHOBP62745 196 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 SMIM15Q7Z3B0 74 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 CLVS1Q8IUQ0 354 aaPredicted RBP2.15□□□□□ -2.07
VPS13A-211ENST00000484581 HIST3H2BBQ8N257 126 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 CXCL16Q9H2A7 254 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 OSTCQ9NRP0 149 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 ACER3Q9NUN7 267 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 MED29Q9NX70 200 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 SS18L2Q9UHA2 77 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 MYH7BA7E2Y1 1941 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 NCKAP5O14513 1909 aa2.15□□□□□ -2.07
VPS13A-211ENST00000484581 ECM29Q5VYK3 1845 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 TOPBP1Q92547 1522 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 KDM5BQ9UGL1 1544 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 A0A087X0T9 212 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 A0A0D9SG52 128 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 A0A1B0GV72 72 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 ARRDC5A6NEK1 342 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 H0YJX3 145 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 IGKV1-16P04430 117 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 RELAQ04206 551 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 RHEBQ15382 184 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 RRN3P1Q2M238 152 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 SCGB2B2Q4G0G5 96 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 GINS4Q9BRT9 223 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 PBOV1Q9GZY1 135 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 MRPL40Q9NQ50 206 aaKnown RBP2.14□□□□□ -2.07
VPS13A-211ENST00000484581 BAIAP2Q9UQB8 552 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 NUMA1Q14980 2115 aa2.14□□□□□ -2.07
VPS13A-211ENST00000484581 PBRM1Q86U86 1689 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 ADAMTS7Q9UKP4 1686 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 A0A1B0GVG6 124 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 HMSDA8MTL9 139 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 J3QQQ9 107 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 CYB5BO43169 146 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 TCL1BO95988 128 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 METTL15P1P0C7V9 234 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 PEBP1P30086 187 aaKnown RBP2.13□□□□□ -2.07
VPS13A-211ENST00000484581 RPL26P61254 145 aaKnown RBP2.13□□□□□ -2.07
VPS13A-211ENST00000484581 NDUFA5Q16718 116 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 TMEM86AQ8N2M4 240 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 SIGLECL1Q8N7X8 197 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 OR8D4Q8NGM9 314 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 MALSU1Q96EH3 234 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 LYSMD1Q96S90 227 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 GPER1Q99527 375 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 PBDC1Q9BVG4 233 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 TMEM133Q9H2Q1 129 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 CKLFQ9UBR5 152 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 RPL26L1Q9UNX3 145 aaKnown RBP2.13□□□□□ -2.07
VPS13A-211ENST00000484581 ICE1Q9Y2F5 2266 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 SYNMO15061 1565 aa2.13□□□□□ -2.07
VPS13A-211ENST00000484581 SCAF11Q99590 1463 aaKnown RBP2.13□□□□□ -2.07
VPS13A-211ENST00000484581 IGLV3-9A0A075B6K5 115 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 MEIS3P1A6NDR6 274 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 ZNF860A6NHJ4 632 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 ZNF705FA8MVS1 300 aaPredicted RBP2.12□□□□□ -2.07
VPS13A-211ENST00000484581 HTR1AP08908 422 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 TRGC1P0CF51 173 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 TFAMQ00059 246 aaKnown RBP2.12□□□□□ -2.07
VPS13A-211ENST00000484581 HES1Q14469 280 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 DPPA3Q6W0C5 159 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 EXOC3-AS1Q8N2X6 119 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 C10orf126Q8N4M7 172 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 ZNF439Q8NDP4 499 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 WFDC5Q8TCV5 224 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 SLAMF6Q96DU3 332 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 TIMM21Q9BVV7 248 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 DDA1Q9BW61 102 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 MIXL1Q9H2W2 232 aa2.12□□□□□ -2.07
VPS13A-211ENST00000484581 TONSLQ96HA7 1378 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 MDC1Q14676 2089 aaKnown RBP2.11□□□□□ -2.07
VPS13A-211ENST00000484581 RTEL1-TNFRSF6BF6WH68 1400 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 YTHDC2Q9H6S0 1430 aaKnown RBP2.11□□□□□ -2.07
VPS13A-211ENST00000484581 DUXBA0A1W2PPF3 345 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 C1orf196B1AJZ1 125 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 GPR31O00270 319 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 NAPSAO96009 420 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 IFNA21P01568 189 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 CLPSP04118 112 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 COX6A1P12074 109 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 EIF5AP63241 154 aaKnown RBP2.11□□□□□ -2.07
VPS13A-211ENST00000484581 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
VPS13A-211ENST00000484581 LCN15Q6UWW0 184 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms