RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 SSX3Q99909 188 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 MEGF9Q9H1U4 602 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 PLEKHA3Q9HB20 300 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 OR51B2Q9Y5P1 312 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 ABCA1O95477 2261 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 MYO9AB2RTY4 2548 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 C5orf52A6NGY3 159 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 UBE2CO00762 179 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 MOSP00540 346 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 IGLV2-23P01705 113 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 SAA1P0DJI8 122 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-210ENST00000483764 RPL29P47914 159 aaKnown RBP13.71□□□□□ -0.21
MRPL28-210ENST00000483764 HES1Q14469 280 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 HNF4GQ14541 408 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 TEPPQ6URK8 271 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 TREML4Q6UXN2 200 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 SSX7Q7RTT5 188 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.21
MRPL28-210ENST00000483764 OR2T10Q8NGZ9 312 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 EAF1Q96JC9 268 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-210ENST00000483764 SLC25A22Q9H936 323 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 LSM4Q9Y4Z0 139 aaKnown RBP13.71□□□□□ -0.21
MRPL28-210ENST00000483764 SOX21Q9Y651 276 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-210ENST00000483764 SVEP1Q4LDE5 3571 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 TEX15Q9BXT5 2789 aa13.71□□□□□ -0.21
MRPL28-210ENST00000483764 TRAV3A0A0B4J244 114 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 CXorf1O96002 111 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 FAM106CPP0CH98 169 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 CD81P60033 236 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 EBI3Q14213 229 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 VMA21Q3ZAQ7 101 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 OR1L8Q8NGR8 309 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 ISOC2Q96AB3 205 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 SMIM7Q9BQ49 75 aa13.7□□□□□ -0.22
MRPL28-210ENST00000483764 A0A1W2PN81 502 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 FBP1P09467 338 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 CHRNA7P36544 502 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 PSG5Q15238 335 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 ELOBQ15370 118 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 C2orf83Q53S99 150 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 FAM120AOSQ5T036 256 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 TEX29Q8N6K0 151 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 CACNG8Q8WXS5 425 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 ANAPC16Q96DE5 110 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 GGTLC1Q9BX51 225 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 ZNF469Q96JG9 3925 aaPredicted RBP13.69□□□□□ -0.22
MRPL28-210ENST00000483764 TRBV24-1A0A075B6N3 115 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 RRHO14718 337 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 SLC25A17O43808 307 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 CNTFRP26992 372 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 RHOBP62745 196 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 TEX45Q8NA69 505 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 SLC35E1Q96K37 410 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
MRPL28-210ENST00000483764 OTOGQ6ZRI0 2925 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 AP4M1O00189 453 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 CLN5O75503 358 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 CD99P14209 185 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 Q8N6K4 173 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 TMEM167AQ8TBQ9 72 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 DOK5Q9P104 306 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 CELSR1Q9NYQ6 3014 aa13.68□□□□□ -0.22
MRPL28-210ENST00000483764 CSPG4Q6UVK1 2322 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 CRYGBP07316 175 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 STAG3L2P0CL84 134 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 STAG3L3P0CL85 134 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 TMEM11P17152 192 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 S100PP25815 95 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 GPX4P36969 197 aaPredicted RBP13.67□□□□□ -0.22
MRPL28-210ENST00000483764 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
MRPL28-210ENST00000483764 MMDQ15546 238 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 BSXQ3C1V8 233 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 SPNS3Q6ZMD2 512 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 C9orf139Q6ZV77 190 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 TMEM144Q7Z5S9 345 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 BCL6BQ8N143 479 aaPredicted RBP13.67□□□□□ -0.22
MRPL28-210ENST00000483764 NPBQ8NG41 125 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 OR4F5Q8NH21 305 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 OR4F4Q96R69 305 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 MGST2Q99735 147 aa13.67□□□□□ -0.22
MRPL28-210ENST00000483764 PPP1R2P9O14990 202 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 NBR2O15453 112 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 S100A9P06702 114 aaKnown RBP13.66□□□□□ -0.22
MRPL28-210ENST00000483764 SMIM6P0DI80 62 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
MRPL28-210ENST00000483764 AKR1D1P51857 326 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 SUB1P53999 127 aaKnown RBP eCLIP13.66□□□□□ -0.225e-8■■■■■ 37.7
MRPL28-210ENST00000483764 PIFOQ8TCI5 191 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 C22orf15Q8WYQ4 148 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 RNF2Q99496 336 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 SIGLEC9Q9Y336 463 aa13.66□□□□□ -0.22
MRPL28-210ENST00000483764 C11orf94C9JXX5 98 aa13.65□□□□□ -0.22
MRPL28-210ENST00000483764 CA2P00918 260 aa13.65□□□□□ -0.22
MRPL28-210ENST00000483764 B2MP61769 119 aa13.65□□□□□ -0.22
MRPL28-210ENST00000483764 RPL8P62917 257 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms