RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TEPPQ6URK8 271 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 UNQ5815/PRO19632Q6UWF5 114 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 THAP8Q8NA92 274 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 LRRC20Q8TCA0 184 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 NPIPB3Q92617 1050 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 SAT2Q96F10 170 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-226ENST00000483656 SLC35E1Q96K37 410 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 RPRMQ9NS64 109 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 VPREB3Q9UKI3 123 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 SLC45A2Q9UMX9 530 aa7.92□□□□□ -1.14
HDAC6-226ENST00000483656 UMAD1C9J7I0 102 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 TEX46H3BTG2 121 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 TRIM77I1YAP6 450 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 CORTO00230 105 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 AGPAT2O15120 278 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 NDUFB8O95169 186 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 IGF1P05019 195 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 LINC00869P0C866 280 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 DEFA4P12838 97 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 OR10J1P30954 320 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 CAMLGP49069 296 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 RAB5CP51148 216 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 RND2P52198 227 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 ELLP55199 621 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-226ENST00000483656 RAB2AP61019 212 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 SERF2P84101 59 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 PRR20EP86478 221 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 PRR20CP86479 221 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 PRR20DP86480 221 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 PRR20BP86481 221 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 PRR20AP86496 221 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 ZNF726P1Q15940 193 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 NDUFA5Q16718 116 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 PXDC1Q5TGL8 231 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 MIC13Q5XKP0 118 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 Q6ZRG5 221 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 OR1L6Q8NGR2 347 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 ACY3Q96HD9 319 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 TMEM68Q96MH6 324 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 TMUB1Q9BVT8 246 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 MED9Q9NWA0 146 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 TMEM160Q9NX00 188 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 LINC00527Q9UJ94 153 aa7.91□□□□□ -1.14
HDAC6-226ENST00000483656 TRAV41A0A0B4J266 112 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 OR2J3O76001 311 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 GATA2P23769 480 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-226ENST00000483656 RPL29P47914 159 aaKnown RBP7.9□□□□□ -1.14
HDAC6-226ENST00000483656 BLOC1S1P78537 153 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 DEFA5Q01523 94 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 TMEM41BQ5BJD5 291 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 GCSAMLQ5JQS6 135 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 FFAR4Q5NUL3 377 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 ETFRF1Q6IPR1 90 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 SPSB3Q6PJ21 355 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 SSX7Q7RTT5 188 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 SLC35E3Q7Z769 313 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 ZNF709Q8N972 641 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 TMEM116Q8NCL8 245 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 FAM213BQ8TBF2 198 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 NOL4LQ96MY1 436 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-226ENST00000483656 GSX1Q9H4S2 264 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-226ENST00000483656 PXMP4Q9Y6I8 212 aa7.9□□□□□ -1.14
HDAC6-226ENST00000483656 HIVEP1P15822 2718 aa7.9□□□□□ -1.15
HDAC6-226ENST00000483656 TRBV9A0A0B4J1U6 114 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 BTBD17A6NE02 478 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 MFSD2BA6NFX1 497 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 C17orf112F2Z3M2 114 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-226ENST00000483656 EIF3GO75821 320 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC6-226ENST00000483656 PPIFP30405 207 aaKnown RBP7.89□□□□□ -1.15
HDAC6-226ENST00000483656 CFHR3Q02985 330 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 TMEM95Q3KNT9 176 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 DPPA3Q6W0C5 159 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 CYP2G1PQ6ZSU1 146 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 RPP25LQ8N5L8 163 aaKnown RBP7.89□□□□□ -1.15
HDAC6-226ENST00000483656 TMEM86BQ8N661 226 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 STPG3Q8N7X2 389 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 BPIFCQ8NFQ6 507 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 OR4X1Q8NH49 305 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 DUX5Q96PT3 197 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF702PQ9H963 129 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 SLC39A9Q9NUM3 307 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 FBXL7Q9UJT9 491 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 S4R3C0 116 aa7.89□□□□□ -1.15
HDAC6-226ENST00000483656 TCRBV4S1A1TA0A5B7 111 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 ATP6V1G1O75348 118 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 TSPAN9O75954 239 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 TSPAN15O95858 294 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 IGLC1P0CG04 106 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 HIST1H1BP16401 226 aaKnown RBP7.88□□□□□ -1.15
HDAC6-226ENST00000483656 B2MP61769 119 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 CCL20P78556 96 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 ZNF90Q03938 601 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 RAB31Q13636 194 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 COMMD7Q86VX2 200 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 OR10G4Q8NGN3 311 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 OR10G9Q8NGN4 311 aa7.88□□□□□ -1.15
HDAC6-226ENST00000483656 OR10G7Q8NGN6 311 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms