RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 ZNF678Q5SXM1 525 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 FAM201AQ5SY85 155 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 SLC48A1Q6P1K1 146 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 TTC33Q6PID6 262 aaPredicted RBP2.41□□□□□ -2.02
SHQ1-208ENST00000482785 FAM231DQ6ZW35 169 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 TCF24Q7RTU0 167 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 GRINAQ7Z429 371 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 COMMD6Q7Z4G1 85 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 CROCCP2Q86T23 111 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 RNF175Q8N4F7 328 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 DEFB125Q8N687 156 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 LINC00337Q8N6G1 96 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 OR11H1Q8NG94 326 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 OR4M1Q8NGD0 313 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 ZNF675Q8TD23 568 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 CASTOR1Q8WTX7 329 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 FMC1Q96HJ9 113 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 ZNF382Q96SR6 550 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 KRTAP1-5Q9BYS1 174 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 FGF23Q9GZV9 251 aaPredicted RBP2.41□□□□□ -2.02
SHQ1-208ENST00000482785 SLC25A31Q9H0C2 315 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 OR51V1Q9H2C8 321 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 PARP11Q9NR21 331 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 FAM206AQ9NX38 181 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 TAS2R7Q9NYW3 318 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 TMEM216Q9P0N5 145 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 VPS29Q9UBQ0 182 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 LRRC42Q9Y546 428 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 WSB1Q9Y6I7 421 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 IGHV3-72A0A0B4J1Y9 119 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 CXCR6O00574 342 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 FFAR1O14842 300 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 FADS1O60427 444 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 CA2P00918 260 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 IFNA21P01568 189 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 IFNA17P01571 189 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 APCSP02743 223 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 ZNF688P0C7X2 276 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 TLX1NBP0CAT3 122 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 EVI2BP34910 448 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 MPIP34949 423 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 MNAT1P51948 309 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 WNT4P56705 351 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 AP3S2P59780 193 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 ESRRGP62508 458 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 CCDC153Q494R4 210 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 ABCA11PQ4W5N1 156 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 SMUG1Q53HV7 270 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 SPIN4Q56A73 249 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 CD200R1LQ6Q8B3 271 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 MARCH3Q86UD3 253 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 RIMKLAQ8IXN7 391 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 LRRC34Q8IZ02 419 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 HS3ST5Q8IZT8 346 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 DYNAPQ8N1N2 210 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 Q8N7P7 452 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 DTD1Q8TEA8 209 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 ZNF414Q96IQ9 312 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 PACRGQ96M98 296 aaPredicted RBP2.4□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM70Q9BUB7 260 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM109Q9BVC6 243 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 OR51E2Q9H255 320 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 C12orf10Q9HB07 376 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 C8orf17Q9NRJ1 99 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 ZNF780BQ9Y6R6 833 aa2.4□□□□□ -2.03
SHQ1-208ENST00000482785 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 TRAV8-3A0A0A6YYJ7 113 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 IGHV7-4-1A0A0J9YVY3 117 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 NBDYA0A0U1RRE5 68 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM72A0PK05 275 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 TMEM114B3SHH9 223 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 H3BP45 60 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 PLIN3O60664 434 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 OR2A4O95047 310 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 IGLV1-51P01701 117 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 SHBGP04278 402 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 TYMSP04818 313 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 M6PRP20645 277 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 ELK4P28324 431 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 CBX5P45973 191 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 MEF2CQ06413 473 aaPredicted RBP2.39□□□□□ -2.03
SHQ1-208ENST00000482785 MPPED2Q15777 294 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 ACSM3Q53FZ2 586 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 TRMT12Q53H54 448 aaKnown RBP2.39□□□□□ -2.03
SHQ1-208ENST00000482785 YIF1BQ5BJH7 314 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 UBE2NLQ5JXB2 153 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 FAM71E1Q6IPT2 247 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 NOXRED1Q6NXP6 359 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 MTERF4Q7Z6M4 381 aaKnown RBP2.39□□□□□ -2.03
SHQ1-208ENST00000482785 NATD1Q8N6N6 113 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 GATD1Q8NB37 220 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 OR4K5Q8NGD3 323 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 OR52R1Q8NGF1 315 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 C16orf78Q8WTQ4 265 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 TESCQ96BS2 214 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 OR2A7Q96R45 310 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 STACQ99469 402 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 PYGO2Q9BRQ0 406 aa2.39□□□□□ -2.03
SHQ1-208ENST00000482785 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms