RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 PTTG2Q9NZH5 202 aa13.92□□□□□ -0.18
SMIM4-204ENST00000482728 MRPL27Q9P0M9 148 aaKnown RBP13.92□□□□□ -0.18
SMIM4-204ENST00000482728 HSPB7Q9UBY9 170 aa13.92□□□□□ -0.18
SMIM4-204ENST00000482728 RPS10-NUDT3A0A1W2PQS6 291 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 IFNA10P01566 189 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 OR4E1P0C645 316 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 SLC25A6P12236 298 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 ANXA7P20073 488 aaKnown RBP13.91□□□□□ -0.18
SMIM4-204ENST00000482728 BTCP35070 178 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 GUCA2BQ16661 112 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 C2orf83Q53S99 150 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 COQ8AQ8NI60 647 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 DTD1Q8TEA8 209 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 RBKSQ9H477 322 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 DAZ1Q9NQZ3 744 aaKnown RBP13.91□□□□□ -0.18
SMIM4-204ENST00000482728 U3KQ87 197 aa13.91□□□□□ -0.18
SMIM4-204ENST00000482728 DHRS2Q13268 280 aa13.9□□□□□ -0.18
SMIM4-204ENST00000482728 MLANAQ16655 118 aa13.9□□□□□ -0.18
SMIM4-204ENST00000482728 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
SMIM4-204ENST00000482728 RNASEH2CQ8TDP1 164 aaKnown RBP13.9□□□□□ -0.18
SMIM4-204ENST00000482728 IGHV3OR16-8A0A075B7F1 116 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 K7EMT4 169 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 SCGB2A1O75556 95 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 TMEM50AO95807 157 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 IFNA21P01568 189 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 C8orf88P0DMB2 117 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 NPY1RP25929 384 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 GGNBP1Q5YKI7 109 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 Q8N1Y9 231 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 WDR12Q9GZL7 423 aaKnown RBP13.89□□□□□ -0.19
SMIM4-204ENST00000482728 FNDC4Q9H6D8 234 aaPredicted RBP13.89□□□□□ -0.19
SMIM4-204ENST00000482728 MLXQ9UH92 298 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 SELENOKQ9Y6D0 94 aa13.89□□□□□ -0.19
SMIM4-204ENST00000482728 C15orf62A8K5M9 175 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 ZNF785A8K8V0 405 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 ZNF207O43670 478 aaKnown RBP13.88□□□□□ -0.19
SMIM4-204ENST00000482728 PITX3O75364 302 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 MED6O75586 246 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 TCRBP04435 133 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 ATP5IP56385 69 aaPredicted RBP13.88□□□□□ -0.19
SMIM4-204ENST00000482728 ETFRF1Q6IPR1 90 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 MZT2BQ6NZ67 158 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 BTNL8Q6UX41 500 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 RBPMS2Q6ZRY4 209 aaKnown RBP13.88□□□□□ -0.19
SMIM4-204ENST00000482728 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 C20orf85Q9H1P6 137 aa13.88□□□□□ -0.19
SMIM4-204ENST00000482728 FAM240BA0A1B0GVZ2 78 aa13.87□□□□□ -0.19
SMIM4-204ENST00000482728 FAM90A26D6RGX4 464 aa13.87□□□□□ -0.19
SMIM4-204ENST00000482728 CLN5O75503 358 aa13.87□□□□□ -0.19
SMIM4-204ENST00000482728 IFNA4P05014 189 aa13.87□□□□□ -0.19
SMIM4-204ENST00000482728 NHLRC4P0CG21 123 aaPredicted RBP13.87□□□□□ -0.19
SMIM4-204ENST00000482728 SLC25A4P12235 298 aa13.87□□□□□ -0.19
SMIM4-204ENST00000482728 TMEM61Q8N0U2 210 aa13.87□□□□□ -0.19
SMIM4-204ENST00000482728 WDR89Q96FK6 387 aaPredicted RBP13.87□□□□□ -0.19
SMIM4-204ENST00000482728 TRAV6A0A075B6T7 132 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 TRAV30A0A087WSZ9 112 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 TRAV25A0A0B4J276 109 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 ADAP1O75689 374 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 CD81P60033 236 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 LAMTOR1Q6IAA8 161 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 C11orf87Q6NUJ2 197 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 ZNF600Q6ZNG1 722 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 ASCL2Q99929 193 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 GINS3Q9BRX5 216 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 TUBA4BQ9H853 241 aa13.86□□□□□ -0.19
SMIM4-204ENST00000482728 TRAV14DV4A0A0A6YYC5 116 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 SCAF4O95104 1147 aaKnown RBP13.85□□□□□ -0.19
SMIM4-204ENST00000482728 FRMD6-AS1P0C7T7 363 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 PRSS54Q6PEW0 395 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 TOMM20LQ6UXN7 152 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 TMEM170AQ8WVE7 144 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 CIB3Q96Q77 187 aaPredicted RBP13.85□□□□□ -0.19
SMIM4-204ENST00000482728 NEURL2Q9BR09 285 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 MAGT1Q9H0U3 335 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 NUDT15Q9NV35 164 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 MRPL36Q9P0J6 103 aaKnown RBP13.85□□□□□ -0.19
SMIM4-204ENST00000482728 SMPXQ9UHP9 88 aa13.85□□□□□ -0.19
SMIM4-204ENST00000482728 SYNGR2O43760 224 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 H2AFB2P0C5Z0 115 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 IGHV4-30-4P0DP06 118 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 IAPPP10997 89 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 RND2P52198 227 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 RAB11AP62491 216 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 RPP30P78346 268 aaKnown RBP13.84□□□□□ -0.19
SMIM4-204ENST00000482728 SLC16A13Q7RTY0 426 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 TMEM116Q8NCL8 245 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 MITD1Q8WV92 249 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 OR10C1Q96KK4 312 aa13.84□□□□□ -0.19
SMIM4-204ENST00000482728 PAIP2BQ9ULR5 123 aaKnown RBP13.84□□□□□ -0.19
SMIM4-204ENST00000482728 PUS1Q9Y606 427 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMIM4-204ENST00000482728 IGHV7-4-1A0A0J9YVY3 117 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 WRBO00258 174 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 UPK1BO75841 260 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 BMI1P35226 326 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 ASAH1Q13510 395 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 OR52B4Q8NGK2 314 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 RHPN1-AS1Q9BWJ2 59 aa13.83□□□□□ -0.2
SMIM4-204ENST00000482728 IGHV3-49A0A0A0MS15 119 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 413.7 ms