RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 HIST1H2BAQ96A08 127 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 ZNF714Q96N38 554 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 CCL13Q99616 98 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 TCEAL7Q9BRU2 100 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 DCTN5Q9BTE1 182 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 QTRT1Q9BXR0 403 aaKnown RBP6.24□□□□□ -1.41
SNX13-208ENST00000482558 DYNLRB1Q9NP97 96 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 BET1LQ9NYM9 111 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 TCF19Q9Y242 345 aa6.24□□□□□ -1.41
SNX13-208ENST00000482558 PUS1Q9Y606 427 aaKnown RBP eCLIP6.24□□□□□ -1.41
SNX13-208ENST00000482558 MED19A0JLT2 244 aaPredicted RBP6.23□□□□□ -1.41
SNX13-208ENST00000482558 PROP1O75360 226 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 VENTXO95231 258 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 GYPAP02724 150 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 RBP4P02753 201 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 S100A8P05109 93 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 OR9G9P0C7N8 305 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 EGR2P11161 476 aaPredicted RBP6.23□□□□□ -1.41
SNX13-208ENST00000482558 CDC34P49427 236 aaPredicted RBP6.23□□□□□ -1.41
SNX13-208ENST00000482558 KLRB1Q12918 225 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 LTC4SQ16873 150 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 RPL39P5Q59GN2 51 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 OR4A47Q6IF82 309 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 ZNF833PQ6ZTB9 187 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 MMD2Q8IY49 270 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 RPP25LQ8N5L8 163 aaKnown RBP6.23□□□□□ -1.41
SNX13-208ENST00000482558 ST6GALNAC3Q8NDV1 305 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 CA5BP1Q8WTZ4 195 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 RNASE6Q93091 150 aaKnown RBP6.23□□□□□ -1.41
SNX13-208ENST00000482558 Q96MF0 132 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 PLEKHA3Q9HB20 300 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 TMEM106BQ9NUM4 274 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 NAT8Q9UHE5 227 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 ARL2-SNX15V9GYD0 113 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 SVILO95425 2214 aa6.23□□□□□ -1.41
SNX13-208ENST00000482558 A0A1B0GV50 99 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 ZFP92A6NM28 416 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 F6UZH7 168 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 H3BTX0 84 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 CLDN34H7C241 214 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 UPK2O00526 184 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 TNFRSF13BO14836 293 aaPredicted RBP6.22□□□□□ -1.41
SNX13-208ENST00000482558 KBTBD11O94819 623 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 USF1P22415 310 aaPredicted RBP6.22□□□□□ -1.41
SNX13-208ENST00000482558 NPY1RP25929 384 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 CHRNB4P30926 498 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 CA7P43166 264 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 RPL29P47914 159 aaKnown RBP6.22□□□□□ -1.41
SNX13-208ENST00000482558 ZNF137PP52743 207 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 SUB1P53999 127 aaKnown RBP eCLIP6.22□□□□□ -1.41
SNX13-208ENST00000482558 ELLP55199 621 aaPredicted RBP6.22□□□□□ -1.41
SNX13-208ENST00000482558 CCL8P80075 99 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 PRCDQ00LT1 54 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 HNF4GQ14541 408 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 ZNF726P1Q15940 193 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 TMEM241Q24JQ0 296 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 AKIRIN2Q53H80 203 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 CYP2G1PQ6ZSU1 146 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 PDPNQ86YL7 162 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 PNKDQ8N490 385 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 ZNF383Q8NA42 475 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 DEFB108BQ8NET1 73 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 CACNG8Q8WXS5 425 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 SLC35E1Q96K37 410 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 WFIKKN1Q96NZ8 548 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 RNF2Q99496 336 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 SDF2L1Q9HCN8 221 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 MIOXQ9UGB7 285 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 OR51B2Q9Y5P1 312 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 GVINP1Q7Z2Y8 2422 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 WDFY4Q6ZS81 3184 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 CACNA1AO00555 2505 aa6.22□□□□□ -1.41
SNX13-208ENST00000482558 ZNF727A8MUV8 499 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 SHISA9B4DS77 424 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 HMGB3O15347 200 aaKnown RBP6.21□□□□□ -1.42
SNX13-208ENST00000482558 CXorf1O96002 111 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 PLAUP00749 431 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 TFF1P04155 84 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 CT45A6P0DMU7 189 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 CT45A5P0DMU8 189 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 CT45A7P0DMV0 189 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 CD99P14209 185 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 S100PP25815 95 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 GPX4P36969 197 aaPredicted RBP6.21□□□□□ -1.42
SNX13-208ENST00000482558 LGALS7P47929 136 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 RND2P52198 227 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 RHOBP62745 196 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 ERHP84090 104 aaKnown RBP6.21□□□□□ -1.42
SNX13-208ENST00000482558 C2orf83Q53S99 150 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 SPRNQ5BIV9 151 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 ZNF841Q6ZN19 808 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 FAM216BQ8N7L0 139 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 OR4C13Q8NGP0 309 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 OR1L8Q8NGR8 309 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 OR10X1Q8NGY0 326 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 OR9G1Q8NH87 305 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 TMEM190Q8WZ59 177 aa6.21□□□□□ -1.42
SNX13-208ENST00000482558 NRGNQ92686 78 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms