RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 SPATA25Q9BR10 227 aa12.77□□□□□ -0.37
NUP58-212ENST00000481980 MAGT1Q9H0U3 335 aa12.77□□□□□ -0.37
NUP58-212ENST00000481980 RBKSQ9H477 322 aa12.77□□□□□ -0.37
NUP58-212ENST00000481980 PAIP2BQ9ULR5 123 aaKnown RBP12.77□□□□□ -0.37
NUP58-212ENST00000481980 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
NUP58-212ENST00000481980 MBPP02686 304 aaPredicted RBP12.76□□□□□ -0.37
NUP58-212ENST00000481980 IAPPP10997 89 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 DEFA4P12838 97 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 POLR2GP62487 172 aaKnown RBP eCLIP12.76□□□□□ -0.37
NUP58-212ENST00000481980 ID3Q02535 119 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 HAGHQ16775 308 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 C10orf55Q5SWW7 151 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 ZC4H2Q9NQZ6 224 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
NUP58-212ENST00000481980 RCL1Q9Y2P8 373 aaKnown RBP12.76□□□□□ -0.37
NUP58-212ENST00000481980 HYDINQ4G0P3 5121 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 E5RGE8 158 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 K7EPK0 472 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 BRI3O95415 125 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 MPC2O95563 127 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 IFNA10P01566 189 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 CAV2P51636 162 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 RAB11AP62491 216 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 OR1L6Q8NGR2 347 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 PSENENQ9NZ42 101 aa12.75□□□□□ -0.37
NUP58-212ENST00000481980 PLECQ15149 4684 aaKnown RBP12.75□□□□□ -0.37
NUP58-212ENST00000481980 TNCP24821 2201 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 DEDDO75618 318 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 OR13C7P0DN81 318 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 MYOD1P15172 320 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 HTR2BP41595 481 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
NUP58-212ENST00000481980 SYNJ2BPP57105 145 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 TAS2R30P59541 319 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 STX12Q86Y82 276 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
NUP58-212ENST00000481980 STRAPQ9Y3F4 350 aaKnown RBP12.74□□□□□ -0.37
NUP58-212ENST00000481980 U3KQ87 197 aa12.74□□□□□ -0.37
NUP58-212ENST00000481980 FXYD6-FXYD2A0A087WZ82 144 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 CORTO00230 105 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 NPY1RP25929 384 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 SPANXN5Q5MJ07 72 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 ZNF343Q6P1L6 599 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 PRSS54Q6PEW0 395 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 ADAMTSL5Q6ZMM2 481 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 GTSCR1Q86UQ5 136 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
NUP58-212ENST00000481980 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 SIGLEC8Q9NYZ4 499 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 THYN1Q9P016 225 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
NUP58-212ENST00000481980 TSC22D2O75157 780 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 CSN3P07498 182 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 APELAP0DMC3 54 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 ZFP69Q49AA0 526 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 OR2C3Q8N628 320 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 SMIM8Q96KF7 97 aa12.72□□□□□ -0.37
NUP58-212ENST00000481980 IGLC7A0M8Q6 106 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 INS-IGF2F8WCM5 200 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 TRBV12-3P01733 135 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 IFNA4P05014 189 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 HIST1H1BP16401 226 aaKnown RBP12.71□□□□□ -0.37
NUP58-212ENST00000481980 P2RY1P47900 373 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 DEFA5Q01523 94 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 MRGPRG-AS1Q2M3A8 158 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 LCN12Q6JVE5 192 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
NUP58-212ENST00000481980 IZUMO1RA6ND01 250 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 NPIPB5A8MRT5 1133 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 TEX22C9J3V5 150 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 H3BP45 60 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 REG1AP05451 166 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 AREGP15514 252 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 HBG1P69891 147 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 HBG2P69892 147 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 IL15RAQ13261 267 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
NUP58-212ENST00000481980 ST6GAL2Q96JF0 529 aa12.7□□□□□ -0.38
NUP58-212ENST00000481980 RPS10-NUDT3A0A1W2PQS6 291 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 SLC25A4P12235 298 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 SLC25A24Q6NUK1 477 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 ZNF546Q86UE3 836 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 OR1P1Q8NH06 330 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 LYRM2Q9NU23 88 aaPredicted RBP12.69□□□□□ -0.38
NUP58-212ENST00000481980 OR5AC2Q9NZP5 309 aa12.69□□□□□ -0.38
NUP58-212ENST00000481980 F11RQ9Y624 299 aaKnown RBP12.69□□□□□ -0.38
NUP58-212ENST00000481980 SMLR1H3BR10 107 aa12.68□□□□□ -0.38
NUP58-212ENST00000481980 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
NUP58-212ENST00000481980 BAXQ07812 192 aa12.68□□□□□ -0.38
NUP58-212ENST00000481980 EXOSC2Q13868 293 aaKnown RBP12.68□□□□□ -0.38
NUP58-212ENST00000481980 C2orf83Q53S99 150 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms