RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CFAP53Q96M91 514 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 TMEM70Q9BUB7 260 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 MIXL1Q9H2W2 232 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 OSTCQ9NRP0 149 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 USE1Q9NZ43 259 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 EPDR1Q9UM22 224 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 ATP6V1DQ9Y5K8 247 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 HEATR5BQ9P2D3 2071 aa0.13□□□□□ -2.39
KDM1A-204ENST00000481879 TRAV9-1A0A075B6T8 112 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 DPRXA6NFQ7 191 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 ZNF736B4DX44 427 aaPredicted RBP0.12□□□□□ -2.39
KDM1A-204ENST00000481879 KLF7O75840 302 aaPredicted RBP0.12□□□□□ -2.39
KDM1A-204ENST00000481879 DCTN3O75935 186 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 TCL1BO95988 128 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 DNAL4O96015 105 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 PATE1Q8WXA2 126 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 PTH2Q96A98 100 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 SMR3AQ99954 134 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 COMMD5Q9GZQ3 224 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 RASL12Q9NYN1 266 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 ERGIC3Q9Y282 383 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 FRAS1Q86XX4 4008 aa0.12□□□□□ -2.39
KDM1A-204ENST00000481879 FAT4Q6V0I7 4981 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 EXOC1LA0A1B0GW35 172 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 A0A1W2PPM0 123 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 OR2T8A6NH00 312 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 CALB1P05937 261 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 TPM3P06753 285 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 HIST1H1TP22492 207 aaPredicted RBP0.11□□□□□ -2.39
KDM1A-204ENST00000481879 RPL5P46777 297 aaKnown RBP0.11□□□□□ -2.39
KDM1A-204ENST00000481879 CDC42P60953 191 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 SPCS3P61009 180 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 SNRPD2P62316 118 aaKnown RBP0.11□□□□□ -2.39
KDM1A-204ENST00000481879 PSG9Q00887 426 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 GKN2Q86XP6 184 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 OR10J5Q8NHC4 309 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 TLNRD1Q9H1K6 362 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 C10orf95Q9H7T3 257 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 PRTFDC1Q9NRG1 225 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 MRPL27Q9P0M9 148 aaKnown RBP0.11□□□□□ -2.39
KDM1A-204ENST00000481879 LAMB4A4D0S4 1761 aa0.11□□□□□ -2.39
KDM1A-204ENST00000481879 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 SYNE1Q8NF91 8797 aaKnown RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 OR4C46A6NHA9 309 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 PSMD12O00232 456 aaPredicted RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 OR2B3O76000 313 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 OR2J2O76002 312 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 PROSCO94903 275 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 CRYZL1O95825 349 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 IFNA10P01566 189 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 AP2S1P53680 142 aaPredicted RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 PSME3P61289 254 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 TPM4P67936 248 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 OR2F1Q13607 317 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 ACOT6Q3I5F7 207 aaPredicted RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 CDKL4Q5MAI5 379 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 LPCAT3Q6P1A2 487 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 GPR146Q96CH1 333 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 MRPS26Q9BYN8 205 aaKnown RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 DCSTAMPQ9H295 470 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 OR51V1Q9H2C8 321 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 HS3ST2Q9Y278 367 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 SLC35A3Q9Y2D2 325 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 UTP11Q9Y3A2 253 aaKnown RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 TMEM56-RWDD3S4R434 201 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 V9GYY5 206 aaPredicted RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 C9orf84Q5VXU9 1444 aa0.1□□□□□ -2.39
KDM1A-204ENST00000481879 SYNE2Q8WXH0 6885 aaKnown RBP0.1□□□□□ -2.39
KDM1A-204ENST00000481879 PTPRSQ13332 1948 aa0.09□□□□□ -2.39
KDM1A-204ENST00000481879 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.09□□□□□ -2.4
KDM1A-204ENST00000481879 CCL16O15467 120 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 KRTAP2-3P0C7H8 128 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 HIST1H1EP10412 219 aaKnown RBP0.09□□□□□ -2.4
KDM1A-204ENST00000481879 HIST3H3Q16695 136 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 LINC01554Q52M75 96 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 BRMS1LQ5PSV4 323 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 LCA10Q71F78 164 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 DDI1Q8WTU0 396 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 C4orf3Q8WVX3 66 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 TSPAN32Q96QS1 320 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 OR52E6Q96RD3 313 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 KRTAP2-4Q9BYR9 128 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 KRTAP2-1Q9BYU5 128 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 C6orf62Q9GZU0 229 aaPredicted RBP0.09□□□□□ -2.4
KDM1A-204ENST00000481879 UBAP1Q9NZ09 502 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 RIC1Q4ADV7 1423 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 ADGRB2O60241 1585 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 GREB1Q4ZG55 1949 aa0.09□□□□□ -2.4
KDM1A-204ENST00000481879 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
KDM1A-204ENST00000481879 MTUS2Q5JR59 1369 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 WRNQ14191 1432 aaPredicted RBP eCLIP0.08□□□□□ -2.4
KDM1A-204ENST00000481879 TRAV26-2A0A0B4J265 109 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 TLCD2A6NGC4 264 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 OR4E1P0C645 316 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 SMIM10L2AP0DMW4 78 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 SMIM10L2BP0DMW5 78 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 CD79AP11912 226 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 S100A4P26447 101 aaKnown RBP0.08□□□□□ -2.4
KDM1A-204ENST00000481879 ESRGQ1W209 222 aa0.08□□□□□ -2.4
KDM1A-204ENST00000481879 SPOPLQ6IQ16 392 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms