RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 VPS13DQ5THJ4 4388 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 TRAV30A0A087WSZ9 112 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 TRAV3A0A0B4J244 114 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 TEX50A0A1B0GTY4 177 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 MEIS3P1A6NDR6 274 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 MPTX1A8MV57 137 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 I3L2K1 104 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 CHEK1O14757 476 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 GABARAPO95166 117 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 KRASP01116 189 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 PMP2P02689 132 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SPP1P10451 314 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SLC25A4P12235 298 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 PGAM2P15259 253 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 G6PCP35575 357 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SNCAP37840 140 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 LPAR6P43657 344 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 RPL5P46777 297 aaKnown RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 RFX2P48378 723 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 HOXA1P49639 335 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 RORCP51449 518 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 TAS2R19P59542 299 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 HSPE1P61604 102 aaKnown RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SRPXP78539 464 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 MEF2DQ14814 521 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 AARDQ4LEZ3 155 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SAMD13Q5VXD3 122 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 MORN3Q6PF18 240 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 TBC1D26Q86UD7 250 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 LHFPL1Q86WI0 220 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 UBAC2Q8NBM4 344 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 DUSP18Q8NEJ0 188 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 OR10W1Q8NGF6 305 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 RNASE11Q8TAA1 199 aaKnown RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 MRGPRFQ96AM1 343 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 RRNAD1Q96FB5 475 aaKnown RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 CLUHP3Q96NS8 147 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 METTL26Q96S19 204 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 ABHD1Q96SE0 405 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 GPHA2Q96T91 129 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 BCL7BQ9BQE9 202 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 CHRDL1Q9BU40 450 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 NXF2Q9GZY0 626 aaKnown RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SEPSECSQ9HD40 501 aaKnown RBP3.07□□□□□ -1.92
VPS13D-208ENST00000481484 COPZ2Q9P299 210 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 SMPXQ9UHP9 88 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
VPS13D-208ENST00000481484 DNAH10Q8IVF4 4471 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 TRAV14DV4A0A0A6YYC5 116 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 IGHV3-35A0A0C4DH35 117 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 A0A0J9YWU9 116 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 TEX48A0A1B0GUV7 120 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 HELTA6NFD8 242 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 C11orf94C9JXX5 98 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 YIF1AO95070 293 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 MT-CO2P00403 227 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 IFNA17P01571 189 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 CD74P04233 296 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 FCER2P06734 321 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 FABP1P07148 127 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 CTSDP07339 412 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-208ENST00000481484 CTSGP08311 255 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 P0C879 139 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 PTHLHP12272 177 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 EDN2P20800 178 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 UCP1P25874 307 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 HLA-DMAP28067 261 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 S100A7P31151 101 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 RPS19P39019 145 aaKnown RBP3.06□□□□□ -1.92
VPS13D-208ENST00000481484 OPRK1P41145 380 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 HTR2BP41595 481 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 MFAP2P55001 183 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 ATP5IP56385 69 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-208ENST00000481484 PIGPP57054 158 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 SPCS3P61009 180 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 PMS2P11Q13670 270 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 TRIM16LQ309B1 348 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 PHLDA2Q53GA4 152 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 PVRIGQ6DKI7 326 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 ETFRF1Q6IPR1 90 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 CEMP1Q6PRD7 247 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-208ENST00000481484 SNX29P2Q8IUI4 249 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 CENPSQ8N2Z9 138 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 OR1S2Q8NGQ3 325 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 OR4X1Q8NH49 305 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 OR52E5Q8NH55 327 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 RNASEH2CQ8TDP1 164 aaKnown RBP3.06□□□□□ -1.92
VPS13D-208ENST00000481484 SMIM4Q8WVI0 70 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 DEDD2Q8WXF8 326 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 IL22RA2Q969J5 263 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 RNF2Q99496 336 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 PRRT1Q99946 306 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 FUNDC2Q9BWH2 189 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 RHPN1-AS1Q9BWJ2 59 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 C1QTNF4Q9BXJ3 329 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 CSTL1Q9H114 145 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 HRH4Q9H3N8 390 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 VSIRQ9H7M9 311 aa3.06□□□□□ -1.92
VPS13D-208ENST00000481484 MAP6D1Q9H9H5 199 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms