RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
USP39-215ENST00000481409 LINC01548A6NM66 108 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 MT-CO2P00403 227 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 CFDP00746 253 aaPredicted RBP7.96□□□□□ -1.14
USP39-215ENST00000481409 IFNA7P01567 189 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 RAB5CP51148 216 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 MFAP2P55001 183 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 MFAP4P55083 255 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 SELENOTP62341 195 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 AKR1C1Q04828 323 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 FOXE3Q13461 319 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 GAMTQ14353 236 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 TEX38Q6PEX7 206 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 RNF152Q8N8N0 203 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 ZNF709Q8N972 641 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 OR5T1Q8NG75 326 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 LRRC20Q8TCA0 184 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 TAF15Q92804 592 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP39-215ENST00000481409 LSM4Q9Y4Z0 139 aaKnown RBP7.96□□□□□ -1.14
USP39-215ENST00000481409 TLN2Q9Y4G6 2542 aa7.96□□□□□ -1.14
USP39-215ENST00000481409 CELSR1Q9NYQ6 3014 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 PSMB11A5LHX3 300 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 UMAD1C9J7I0 102 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 G3V318 75 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 K7EIM0 57 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 CLN5O75503 358 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 MBP02144 154 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 APELAP0DMC3 54 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 SPP1P10451 314 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 RPL7L1Q6DKI1 246 aaKnown RBP7.95□□□□□ -1.14
USP39-215ENST00000481409 TEX261Q6UWH6 196 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 BTNL8Q6UX41 500 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 Q6ZSV7 163 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 ZNF767PQ75MW2 155 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 THAP8Q8NA92 274 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 OR2G3Q8NGZ4 309 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 OR4F5Q8NH21 305 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 EEF1AKMT3Q96AZ1 226 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 TRGV9Q99603 122 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 SMIM3Q9BZL3 60 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 FNDC4Q9H6D8 234 aaPredicted RBP7.95□□□□□ -1.14
USP39-215ENST00000481409 WFDC1Q9HC57 220 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 ZNF355PQ9NSJ1 428 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 C21orf62Q9NYP8 219 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 FBXL7Q9UJT9 491 aa7.95□□□□□ -1.14
USP39-215ENST00000481409 UBE2L5PA0A1B0GUS4 154 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 SMCO3A2RU48 225 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 SH2D7A6NKC9 451 aaPredicted RBP7.94□□□□□ -1.14
USP39-215ENST00000481409 TRGV3P03979 118 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 FGF7P21781 194 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 PSMB8P28062 276 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 S100A7P31151 101 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 RPL29P47914 159 aaKnown RBP7.94□□□□□ -1.14
USP39-215ENST00000481409 RHOGP84095 191 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 ATP5G2Q06055 141 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 PXDC1Q5TGL8 231 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 ACSM6Q6P461 480 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 SPSB3Q6PJ21 355 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 Q6ZS46 218 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 Q71RC1 249 aaPredicted RBP7.94□□□□□ -1.14
USP39-215ENST00000481409 S100A7AQ86SG5 101 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 SCARB1Q8WTV0 552 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 BSCL2Q96G97 398 aaPredicted RBP7.94□□□□□ -1.14
USP39-215ENST00000481409 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 C19orf24Q9BVV8 132 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 NPCDR1Q9BY65 106 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 SERTAD4Q9NUC0 356 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 DMRT1Q9Y5R6 373 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
USP39-215ENST00000481409 CYSRT1A8MQ03 144 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 GNG7O60262 68 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 OR2J3O76001 311 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 ATP6V0CP27449 155 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 RAB9AP51151 201 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 RND2P52198 227 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 YPEL3P61236 119 aaPredicted RBP7.93□□□□□ -1.14
USP39-215ENST00000481409 C15orf32Q32M92 178 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 DPPA3Q6W0C5 159 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 MYOZ3Q8TDC0 251 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 NPIPB3Q92617 1050 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 NOL4LQ96MY1 436 aaPredicted RBP7.93□□□□□ -1.14
USP39-215ENST00000481409 SONP18583 2426 aaKnown RBP7.93□□□□□ -1.14
USP39-215ENST00000481409 MXRA5Q9NR99 2828 aa7.93□□□□□ -1.14
USP39-215ENST00000481409 SVEP1Q4LDE5 3571 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 ZFP92A6NM28 416 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 RGS13O14921 159 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 AGPAT2O15120 278 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 NUPL2O15504 423 aaKnown RBP7.92□□□□□ -1.14
USP39-215ENST00000481409 NDUFB8O95169 186 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 PF4V1P10720 104 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 OR10J1P30954 320 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 CAMLGP49069 296 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 TPPP2P59282 170 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 Q6ZRG5 221 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 HSD17B11Q8NBQ5 300 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 ZNF680Q8NEM1 530 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 OR4X2Q8NGF9 303 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms