RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TRGV2A0A075B6R0 118 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 PATE3B3GLJ2 98 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 GFRA3O60609 400 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 GTF3AQ92664 365 aaKnown RBP8.07□□□□□ -1.12
VEGFA-212ENST00000480614 IGLV3-21P80748 117 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-212ENST00000480614 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 RFLNBQ8N5W9 214 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 SLC25A2Q9BXI2 301 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 TBL2Q9Y4P3 447 aaKnown RBP8.07□□□□□ -1.12
VEGFA-212ENST00000480614 CDCP2Q5VXM1 449 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 SLC25A45Q8N413 288 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-212ENST00000480614 WDR90Q96KV7 1748 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 TRAV24A0A0B4J272 114 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 C1QTNF5Q9BXJ0 243 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 SPCS1Q9Y6A9 102 aa8.07□□□□□ -1.12
VEGFA-212ENST00000480614 GDF15Q99988 308 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 VGLL1Q99990 258 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 PIEZO2Q9H5I5 2752 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 HIGD1CA8MV81 97 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 TLN1Q9Y490 2541 aaKnown RBP8.06□□□□□ -1.12
VEGFA-212ENST00000480614 KIAA1671Q9BY89 1806 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 EFEMP2O95967 443 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 MORN3Q6PF18 240 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-212ENST00000480614 Q9H3A6 140 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 CYSLTR1Q9Y271 337 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 IGKV1D-33P01593 117 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 IGKV1-33P01594 117 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 UCP1P25874 307 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 CTAG1AP78358 180 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 RNASE6Q93091 150 aaKnown RBP8.06□□□□□ -1.12
VEGFA-212ENST00000480614 NRTNQ99748 197 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 MRPS18CQ9Y3D5 142 aaKnown RBP8.06□□□□□ -1.12
VEGFA-212ENST00000480614 GGTLC3B5MD39 225 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 OR5AN1Q8NGI8 311 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 KIAA1644Q3SXP7 199 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 RPL39P5Q59GN2 51 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 GTSCR1Q86UQ5 136 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 LEAP2Q969E1 77 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 C5orf30Q96GV9 206 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 NBR2O15453 112 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 CECR9P0C854 216 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 NCOR1P1Q9H4R4 102 aa8.06□□□□□ -1.12
VEGFA-212ENST00000480614 SEPSECSQ9HD40 501 aaKnown RBP8.06□□□□□ -1.12
VEGFA-212ENST00000480614 IGKV3-20P01619 116 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 BSPH1Q075Z2 132 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 DSCR9P59020 149 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SP9P0CG40 484 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 UBE2CO00762 179 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SSC4DQ8WTU2 575 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 TNS1Q9HBL0 1735 aaKnown RBP8.05□□□□□ -1.12
VEGFA-212ENST00000480614 DPM2O94777 84 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 ADAMTS9Q9P2N4 1935 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 NDUFA3O95167 84 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 PPP1R32Q7Z5V6 425 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 WDYHV1Q96HA8 205 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SSBP4Q9BWG4 385 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SLC25A15Q9Y619 301 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 IQCF6A8MYZ5 107 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SNRPCP09234 159 aaKnown RBP8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SMIM10L1P0DMW3 83 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 CTHRC1Q96CG8 243 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 SMIM10Q96HG1 83 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 MS4A6AQ9H2W1 248 aa8.05□□□□□ -1.12
VEGFA-212ENST00000480614 LINC00614P0C842 121 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 EFNB1P98172 346 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 PRDM13Q9H4Q3 707 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 FABP5P3A8MUU1 101 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-212ENST00000480614 F2Z2F3 143 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 PAX2Q02962 417 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 PGPEP1LA6NFU8 196 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 SRSF1Q07955 248 aaKnown RBP eCLIP8.04□□□□□ -1.121e-7■■□□□ 13.5
VEGFA-212ENST00000480614 S100A7L2Q5SY68 101 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 FAM166AQ6J272 317 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 C18orf15Q96N68 181 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 IGKV1D-42A0A075B6H8 117 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
VEGFA-212ENST00000480614 TRAV21A0A0B4J279 112 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 H3BTX0 84 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 H2BFSP57053 126 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 LDLRAD2Q5SZI1 272 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 STHQ8IWL8 128 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 MRPL20Q9BYC9 149 aaKnown RBP8.03□□□□□ -1.12
VEGFA-212ENST00000480614 SMPXQ9UHP9 88 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 ABCA12Q86UK0 2595 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 CA1P00915 261 aaPredicted RBP8.03□□□□□ -1.12
VEGFA-212ENST00000480614 TCRBV4S1A1TA0A5B7 111 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 C12orf77C9JDV5 145 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 FUT5Q11128 374 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 ZNRF1Q8ND25 227 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 TRAV8-2A0A0B4J237 113 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 REPIN1Q9BWE0 567 aaKnown RBP8.03□□□□□ -1.12
VEGFA-212ENST00000480614 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 CD7P09564 240 aa8.03□□□□□ -1.12
VEGFA-212ENST00000480614 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms