RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 PCDH15Q96QU1 1955 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.89□□□□□ -0.51
COL20A1-206ENST00000479501 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 DKK1O94907 266 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 IGLV3-1P01715 115 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 TFPI2P48307 235 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 TECTAO75443 2155 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 UPK2O00526 184 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 C1QTNF9P0C862 333 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
COL20A1-206ENST00000479501 BMI1P35226 326 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 Q6ZS92 163 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 MOSP00540 346 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 ERASQ7Z444 233 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 CACNG8Q8WXS5 425 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL20A1-206ENST00000479501 NOTCH3Q9UM47 2321 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 MBD3L1Q8WWY6 194 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 COQ2Q96H96 371 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 FBXL15Q9H469 300 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 WDR83OSQ9Y284 106 aa11.89□□□□□ -0.51
COL20A1-206ENST00000479501 IGKV1-6A0A0C4DH72 117 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 RNASE6Q93091 150 aaKnown RBP11.88□□□□□ -0.51
COL20A1-206ENST00000479501 TMEM242Q9NWH2 141 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 DPM3Q9P2X0 92 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 TRAV9-1A0A075B6T8 112 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 MFAP4P55083 255 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 TCF24Q7RTU0 167 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 VSIRQ9H7M9 311 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 RFNGQ9Y644 331 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 GATA2P23769 480 aaPredicted RBP11.88□□□□□ -0.51
COL20A1-206ENST00000479501 ZGRF1Q86YA3 2104 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 MAP1LC3AQ9H492 121 aa11.88□□□□□ -0.51
COL20A1-206ENST00000479501 RPUSD1Q9UJJ7 312 aaKnown RBP11.88□□□□□ -0.51
COL20A1-206ENST00000479501 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 A0A1B0GV72 72 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 FCGR2BP31994 310 aaPredicted RBP11.87□□□□□ -0.51
COL20A1-206ENST00000479501 NUTF2P61970 127 aaKnown RBP11.87□□□□□ -0.51
COL20A1-206ENST00000479501 SLX1AQ9BQ83 275 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 LIME1Q9H400 295 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 A0A0G2JRQ6 117 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 NPIPB11E5RHQ5 1161 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 NCOA6Q14686 2063 aaPredicted RBP11.87□□□□□ -0.51
COL20A1-206ENST00000479501 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 CLEC2AQ6UVW9 174 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 UNQ5815/PRO19632Q6UWF5 114 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 MUC6Q6W4X9 2439 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 C7orf71A4D174 169 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 H7C2G1 150 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 ADMP35318 185 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 Q6ZRM9 215 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 VKORC1Q9BQB6 163 aa11.87□□□□□ -0.51
COL20A1-206ENST00000479501 ZNF256Q9Y2P7 627 aaPredicted RBP11.87□□□□□ -0.51
COL20A1-206ENST00000479501 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 ZNF474Q6S9Z5 364 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-206ENST00000479501 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 ATXN7O15265 892 aaPredicted RBP11.86□□□□□ -0.51
COL20A1-206ENST00000479501 TBR1Q16650 682 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 ZNF414Q96IQ9 312 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 PGPEP1LA6NFU8 196 aa11.86□□□□□ -0.51
COL20A1-206ENST00000479501 MBNL3Q9NUK0 354 aaKnown RBP11.86□□□□□ -0.51
COL20A1-206ENST00000479501 TRAV30A0A087WSZ9 112 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 A6NNC1 897 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 TMEM14EPQ6UXP3 125 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 DTX1Q86Y01 620 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 ATRXP46100 2492 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 RNASEH2CQ8TDP1 164 aaKnown RBP11.85□□□□□ -0.51
COL20A1-206ENST00000479501 DLEU1O43261 78 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 BEND2Q8NDZ0 799 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 OR52E5Q8NH55 327 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 RPP25LQ8N5L8 163 aaKnown RBP11.85□□□□□ -0.51
COL20A1-206ENST00000479501 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
COL20A1-206ENST00000479501 IGKV1D-17A0A075B6S4 117 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 LINC00473A8K010 186 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 GCSAMLQ5JQS6 135 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 COX6CP09669 75 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 SAPCD1Q5SSQ6 148 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 LDLRAD2Q5SZI1 272 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 MTURNQ8N3F0 131 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 NEU4Q8WWR8 484 aaPredicted RBP11.84□□□□□ -0.51
COL20A1-206ENST00000479501 TMEM133Q9H2Q1 129 aa11.84□□□□□ -0.51
COL20A1-206ENST00000479501 PRCDQ00LT1 54 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms