RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 GIMAP1Q8WWP7 306 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 LSM10Q969L4 123 aaKnown RBP3.12□□□□□ -1.91
RPN1-203ENST00000479113 TRIM63Q969Q1 353 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 MARC2Q969Z3 335 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 SLC25A46Q96AG3 418 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 MOB3AQ96BX8 217 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 DGCR14Q96DF8 476 aaKnown RBP3.12□□□□□ -1.91
RPN1-203ENST00000479113 BSCL2Q96G97 398 aaPredicted RBP3.12□□□□□ -1.91
RPN1-203ENST00000479113 NARS2Q96I59 477 aaKnown RBP3.12□□□□□ -1.91
RPN1-203ENST00000479113 TSC22D3Q99576 134 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 WFDC10AQ9H1F0 79 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 DAZ1Q9NQZ3 744 aaKnown RBP3.12□□□□□ -1.91
RPN1-203ENST00000479113 BET1LQ9NYM9 111 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 C21orf62Q9NYP8 219 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 COMMD9Q9P000 198 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 MRPL27Q9P0M9 148 aaKnown RBP3.12□□□□□ -1.91
RPN1-203ENST00000479113 PRNDQ9UKY0 176 aa3.12□□□□□ -1.91
RPN1-203ENST00000479113 TENM3Q9P273 2699 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 IGHV3-49A0A0A0MS15 119 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 TRAV14DV4A0A0A6YYC5 116 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 TRAV3A0A0B4J244 114 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 LCE6AA0A183 80 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 TEX50A0A1B0GTY4 177 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RPS10-NUDT3A0A1W2PQS6 291 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 A8MZ25 164 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 E7EUB6 86 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RBFOX2O43251 390 aaKnown RBP eCLIP3.11□□□□□ -1.91
RPN1-203ENST00000479113 GNG7O60262 68 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 NOL3O60936 208 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 PGLYRP1O75594 196 aaPredicted RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 ATG12O94817 140 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 LY6G6CO95867 125 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 CRYGCP07315 174 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 EDN2P20800 178 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RCVRNP35243 200 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 TGFBR1P36897 503 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 HOXA1P49639 335 aaPredicted RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 RORCP51449 518 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 MFAP4P55083 255 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 NANOS2P60321 138 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 MSMO1Q15800 293 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 SCGB2B2Q4G0G5 96 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 KCTD21Q4G0X4 260 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RNASE10Q5GAN6 216 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 THOC7Q6I9Y2 204 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 SPSB3Q6PJ21 355 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 UNQ9165/PRO28630Q6UXU0 137 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 TBC1D26Q86UD7 250 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 GBGT1Q8N5D6 347 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 SLC35G3Q8N808 338 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 VN1R17PQ8TDU5 208 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 FCAMRQ8WWV6 532 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 AP3S1Q92572 193 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 TMEM230Q96A57 120 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 SLC25A38Q96DW6 304 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RRNAD1Q96FB5 475 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 SPAG8Q99932 426 aaPredicted RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 SRSF8Q9BRL6 282 aaKnown RBP3.11□□□□□ -1.91
RPN1-203ENST00000479113 GINS3Q9BRX5 216 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 MLXQ9UH92 298 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 RABAC1Q9UI14 185 aa3.11□□□□□ -1.91
RPN1-203ENST00000479113 IGLV11-55A0A075B6I3 123 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 IGHV3OR16-13A0A075B7E8 117 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 IGHV3-74A0A0B4J1X5 117 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 TRAV25A0A0B4J276 109 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 IGHV3-66A0A0C4DH42 116 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 A0A0J9YWU9 116 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 TEX13DA0A0J9YY54 714 aaPredicted RBP3.1□□□□□ -1.91
RPN1-203ENST00000479113 IGLC7A0M8Q6 106 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 TMEM213A2RRL7 107 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 J3KRW8 73 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 NDUFA4O00483 81 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 ST8SIA3O43173 380 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 HPGDSO60760 199 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 IGHV3-48P01763 117 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 IFNA4P05014 189 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 NPBWR1P48145 328 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 PPP5CP53041 499 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 CMC4P56277 68 aaPredicted RBP3.1□□□□□ -1.91
RPN1-203ENST00000479113 BRWD1-AS2P59051 145 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 VBP1P61758 197 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 WT1-ASQ06250 92 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 MRGPRG-AS1Q2M3A8 158 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 DEFB135Q30KP9 77 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 SPINK9Q5DT21 86 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 MZT2BQ6NZ67 158 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 DHRS11Q6UWP2 260 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 APRG1Q8IVJ8 170 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 CCDC71LQ8N9Z2 235 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 TMEM116Q8NCL8 245 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 DUSP18Q8NEJ0 188 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 ZNF502Q8TBZ5 544 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 MRGPRFQ96AM1 343 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 RBM38Q9H0Z9 239 aaKnown RBP3.1□□□□□ -1.91
RPN1-203ENST00000479113 C5orf66Q9H5L9 145 aa3.1□□□□□ -1.91
RPN1-203ENST00000479113 EDA2RQ9HAV5 297 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms