RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PFN4Q8NHR9 129 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BHQ93079 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 GPER1Q99527 375 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BNQ99877 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H2BMQ99879 126 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 LINC00467Q9BRT7 94 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 EURLQ9NYK6 297 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 PLXND1Q9Y4D7 1925 aa-0.15□□□□□ -2.43
HPS3-205ENST00000478525 UNC79Q9P2D8 2635 aa-0.16□□□□□ -2.43
HPS3-205ENST00000478525 TRBV20OR9-2A0A075B6H5 130 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 PQLC2LA1A4F0 135 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 ZNF879B4DU55 563 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 FTCDNL1E5RQL4 147 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 M0R378 163 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 LYZL6O75951 148 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 ATP6V1G2O95670 118 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 ZNF682O95780 498 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 OCMP0CE72 109 aaPredicted RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 PET100P0DJ07 73 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 MGST1P10620 155 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 SPI1P17947 270 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 S100A4P26447 101 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 FKBP2P26885 142 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 KDELR2P33947 212 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 AP2S1P53680 142 aaPredicted RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 AP3S2P59780 193 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 TNFAIP6P98066 277 aaPredicted RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 STX3Q13277 289 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 SPINK13Q1W4C9 94 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 HIST3H2BBQ8N257 126 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 PACRGLQ8N7B6 248 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 SPERTQ8NA61 448 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 LINC00301Q8NCQ3 95 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 OR5A1Q8NGJ0 315 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 CNBD2Q96M20 576 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 DCUN1D5Q9BTE7 237 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 FAM103A1Q9BTL3 118 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 OR8D2Q9GZM6 311 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 TCEAL2Q9H3H9 227 aaPredicted RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 CHMP4BQ9H444 224 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 TMEM138Q9NPI0 162 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 PRTFDC1Q9NRG1 225 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 MRM2Q9UI43 246 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 DKKL1Q9UK85 242 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 EPDR1Q9UM22 224 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 PXMP4Q9Y6I8 212 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 U3KQA8 63 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 DSTQ03001 7570 aaKnown RBP-0.16□□□□□ -2.44
HPS3-205ENST00000478525 AHCTF1Q8WYP5 2266 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 ABCA2Q9BZC7 2435 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 ABCA12Q86UK0 2595 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 FLNCQ14315 2725 aa-0.16□□□□□ -2.44
HPS3-205ENST00000478525 UBR2Q8IWV8 1755 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 NINQ8N4C6 2090 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 SCN8AQ9UQD0 1980 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 DOPEY2Q9Y3R5 2298 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 TRAV9-1A0A075B6T8 112 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 TCRBV4S1A1TA0A5B7 111 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 ODAMA1E959 279 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 C5orf67F2Z3F1 127 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 LST1O00453 97 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 AZIN1O14977 448 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 HPGDSO60760 199 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 CD3DP04234 171 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 S100A9P06702 114 aaKnown RBP-0.17□□□□□ -2.44
HPS3-205ENST00000478525 CXCL2P19875 107 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 CASP1P29466 404 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 XIAPP98170 497 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 ANGPT1Q15389 498 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 AADACL3Q5VUY0 350 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 Q6ZS49 121 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 PRR15Q8IV56 129 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 CD302Q8IX05 232 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 SIGLECL1Q8N7X8 197 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 OR5B17Q8NGF7 314 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 OR10AG1Q8NH19 301 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 MRPL30Q8TCC3 161 aaKnown RBP-0.17□□□□□ -2.44
HPS3-205ENST00000478525 RNASEH2CQ8TDP1 164 aaKnown RBP-0.17□□□□□ -2.44
HPS3-205ENST00000478525 SLC37A2Q8TED4 501 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 DNAJC9Q8WXX5 260 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 TTC28Q96AY4 2481 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 GPR146Q96CH1 333 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 DERL1Q9BUN8 251 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 DERL2Q9GZP9 239 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 WDR61Q9GZS3 305 aaKnown RBP-0.17□□□□□ -2.44
HPS3-205ENST00000478525 OR52A5Q9H2C5 316 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 ENPP5Q9UJA9 477 aa-0.17□□□□□ -2.44
HPS3-205ENST00000478525 BOKQ9UMX3 212 aaPredicted RBP-0.17□□□□□ -2.44
HPS3-205ENST00000478525 LSM5Q9Y4Y9 91 aaKnown RBP-0.17□□□□□ -2.44
HPS3-205ENST00000478525 KIF15Q9NS87 1388 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 MYO7AQ13402 2215 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 F8W1H4 67 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 AHSA1O95433 338 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 COX7CP15954 63 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 UGT2B7P16662 529 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 CXCL3P19876 107 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 SYT1P21579 422 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 MAGEA2P43356 314 aa-0.18□□□□□ -2.44
HPS3-205ENST00000478525 MARCKSL1P49006 195 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms