RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 ZNF257Q9Y2Q1 563 aa3.81□□□□□ -1.8
ITGA4-209ENST00000478440 UFC1Q9Y3C8 167 aa3.81□□□□□ -1.8
ITGA4-209ENST00000478440 KIF25-AS1Q9Y6Z4 181 aa3.81□□□□□ -1.8
ITGA4-209ENST00000478440 TRAV25A0A0B4J276 109 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 OR4C46A6NHA9 309 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 IGLL5B9A064 214 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 LGALS9O00182 355 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 FABP7O15540 132 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 FCGR3BO75015 233 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 ATP5HO75947 161 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 NAPSAO96009 420 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 IGLV2-23P01705 113 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 SAA1P0DJI8 122 aaPredicted RBP3.8□□□□□ -1.8
ITGA4-209ENST00000478440 HIST1H1BP16401 226 aaKnown RBP3.8□□□□□ -1.8
ITGA4-209ENST00000478440 CD36P16671 472 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 GADD45AP24522 165 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 RANBP1P43487 201 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 RPL27AP46776 148 aaKnown RBP3.8□□□□□ -1.8
ITGA4-209ENST00000478440 UBE2KP61086 200 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 ARFRP1Q13795 201 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 CDK10Q15131 360 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 RAB11BQ15907 218 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 HSD17B12Q53GQ0 312 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 C10orf55Q5SWW7 151 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 LINC00242Q5T6M2 205 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 LEMD1Q68G75 181 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 PLET1Q6UQ28 207 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 KCTD9Q7L273 389 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 C10orf67Q8IYJ2 551 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 OR56B1Q8NGI3 324 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 OR4A4PQ8NGN8 299 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 OR4A5Q8NH83 315 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 VSTM2AQ8TAG5 236 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 MARC2Q969Z3 335 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 CXorf58Q96LI9 332 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 AGMATQ9BSE5 352 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
ITGA4-209ENST00000478440 HRASLSQ9HDD0 168 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 MLXQ9UH92 298 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 CLEC2DQ9UHP7 191 aa3.8□□□□□ -1.8
ITGA4-209ENST00000478440 DIMT1Q9UNQ2 313 aaKnown RBP3.8□□□□□ -1.8
ITGA4-209ENST00000478440 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
ITGA4-209ENST00000478440 IGKV3-7A0A075B6H7 116 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 TRBV7-1A0A0A6YYK4 115 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 TMEM213A2RRL7 107 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 EFCAB10A6NFE3 127 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 SOCS1O15524 211 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 LALBAP00709 142 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 REG1AP05451 166 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 EIF4EP06730 217 aaKnown RBP3.79□□□□□ -1.8
ITGA4-209ENST00000478440 RPA2P15927 270 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 CTRB1P17538 263 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 TFPI2P48307 235 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 WNT4P56705 351 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 EWSR1Q01844 656 aaKnown RBP eCLIP3.79□□□□□ -1.8
ITGA4-209ENST00000478440 ZNF45Q02386 682 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 ST3GAL4Q11206 333 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 ACSM3Q53FZ2 586 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 CTRB2Q6GPI1 263 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 LINC00336Q6ZUF6 198 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 AHSA2Q719I0 299 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 GPHB5Q86YW7 130 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 VKORC1L1Q8N0U8 176 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 TTC9CQ8N5M4 171 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 UBAC2Q8NBM4 344 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 OR11H2Q8NH07 326 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 OR4S2Q8NH73 311 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 CD300LFQ8TDQ1 290 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 PCNPQ8WW12 178 aaKnown RBP3.79□□□□□ -1.8
ITGA4-209ENST00000478440 TCTEX1D2Q8WW35 142 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 PTX4Q96A99 478 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 GALNT14Q96FL9 552 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 ARHGAP5-AS1Q96IT6 56 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 PGLYRP3Q96LB9 341 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 SPAG8Q99932 426 aaPredicted RBP3.79□□□□□ -1.8
ITGA4-209ENST00000478440 RARRES2Q99969 163 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 PECRQ9BY49 303 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 C5orf66Q9H5L9 145 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 SDHAF2Q9NX18 166 aa3.79□□□□□ -1.8
ITGA4-209ENST00000478440 SMPD3Q9NY59 655 aaPredicted RBP3.79□□□□□ -1.8
ITGA4-209ENST00000478440 MRPL27Q9P0M9 148 aaKnown RBP3.79□□□□□ -1.8
ITGA4-209ENST00000478440 TRBV6-6A0A0A6YYG2 114 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 TRBV9A0A0B4J1U6 114 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 KIR2DL5BA0A0G2JN68 375 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 KIR2DL5BA0A0G2JPC4 375 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 SRRM4A7MD48 611 aaKnown RBP3.78□□□□□ -1.8
ITGA4-209ENST00000478440 A8MWP6 167 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 DEFB4AO15263 64 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 CA1P00915 261 aaPredicted RBP3.78□□□□□ -1.8
ITGA4-209ENST00000478440 HRASP01112 189 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 CRYGBP07316 175 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 GALP22466 123 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 MAS1LP35410 378 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 RPS11P62280 158 aaKnown RBP eCLIP3.78□□□□□ -1.8
ITGA4-209ENST00000478440 UNC119Q13432 240 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 LBHQ53QV2 105 aaPredicted RBP3.78□□□□□ -1.8
ITGA4-209ENST00000478440 ZNF880Q6PDB4 577 aa3.78□□□□□ -1.8
ITGA4-209ENST00000478440 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms