RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 A0A0B4J2A0 478 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 IGHV7-4-1A0A0J9YVY3 117 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 A0A1B0GU03 582 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 GNG7O60262 68 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 HOXA1P49639 335 aaPredicted RBP11.59□□□□□ -0.55
COMMD6-209ENST00000477377 RELQ04864 619 aaPredicted RBP11.59□□□□□ -0.55
COMMD6-209ENST00000477377 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 DUSP18Q8NEJ0 188 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 RNASE11Q8TAA1 199 aaKnown RBP11.59□□□□□ -0.55
COMMD6-209ENST00000477377 RNF2Q99496 336 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 RETNQ9HD89 108 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 SHPKQ9UHJ6 478 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 KCNIP3Q9Y2W7 256 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
COMMD6-209ENST00000477377 CORTO00230 105 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 CLN5O75503 358 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 APOHP02749 345 aaPredicted RBP11.58□□□□□ -0.56
COMMD6-209ENST00000477377 SUB1P53999 127 aaKnown RBP eCLIP11.58□□□□□ -0.561e-7■■■■■ 52.1
COMMD6-209ENST00000477377 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
COMMD6-209ENST00000477377 OR52B4Q8NGK2 314 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 OR4X1Q8NH49 305 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 DEDD2Q8WXF8 326 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
COMMD6-209ENST00000477377 SPATA25Q9BR10 227 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 RHPN1-AS1Q9BWJ2 59 aa11.58□□□□□ -0.56
COMMD6-209ENST00000477377 IGHV3-49A0A0A0MS15 119 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 PITX3O75364 302 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 NXPH3O95157 252 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 SULT1A3P0DMM9 295 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 SULT1A4P0DMN0 295 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 FAUP35544 74 aaKnown RBP11.57□□□□□ -0.56
COMMD6-209ENST00000477377 HTR2BP41595 481 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 NPBWR1P48145 328 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 AP3S2P59780 193 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 ANKRD55Q3KP44 614 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 TMEM128Q5BJH2 165 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 SLC16A13Q7RTY0 426 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 LRTM2Q8N967 370 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 HSPB7Q9UBY9 170 aa11.57□□□□□ -0.56
COMMD6-209ENST00000477377 TRAV14DV4A0A0A6YYC5 116 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 YIF1AO95070 293 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 IGKV1-17P01599 117 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 CCR6P51684 374 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 PRSS54Q6PEW0 395 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 TMED4Q7Z7H5 227 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 LGI3Q8N145 548 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 SLC25A21Q9BQT8 299 aaPredicted RBP11.56□□□□□ -0.56
COMMD6-209ENST00000477377 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
COMMD6-209ENST00000477377 PUS1Q9Y606 427 aaKnown RBP eCLIP11.56□□□□□ -0.56
COMMD6-209ENST00000477377 PLECQ15149 4684 aaKnown RBP11.56□□□□□ -0.56
COMMD6-209ENST00000477377 IGHV3OR16-13A0A075B7E8 117 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 IGHV3-74A0A0B4J1X5 117 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 BTCP35070 178 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 OPRK1P41145 380 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 PPP1R1AQ13522 171 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 SMCO1Q147U7 214 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 SPANXN2Q5MJ10 180 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 RBKSQ9H477 322 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
COMMD6-209ENST00000477377 UBQLN2Q9UHD9 624 aa11.55□□□□□ -0.56
COMMD6-209ENST00000477377 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 SFT2D2O95562 160 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 IGLC1P0CG04 106 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 TIGITQ495A1 244 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 CASC10Q5T4H9 136 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 LAMTOR1Q6IAA8 161 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
COMMD6-209ENST00000477377 ST8SIA2Q92186 375 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
COMMD6-209ENST00000477377 LYSTQ99698 3801 aa11.53□□□□□ -0.56
COMMD6-209ENST00000477377 ANXA3P12429 323 aa11.53□□□□□ -0.56
COMMD6-209ENST00000477377 SRPXP78539 464 aa11.53□□□□□ -0.56
COMMD6-209ENST00000477377 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
COMMD6-209ENST00000477377 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 NDUFB6O95139 128 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 NPY1RP25929 384 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 ZNF124Q15973 351 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 GGTLC1Q9BX51 225 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 FLVCR2Q9UPI3 526 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 U3KQ87 197 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 U3KQE9 123 aa11.52□□□□□ -0.57
COMMD6-209ENST00000477377 IGHV3-66A0A0C4DH42 116 aa11.51□□□□□ -0.57
COMMD6-209ENST00000477377 DFFBO76075 338 aa11.51□□□□□ -0.57
COMMD6-209ENST00000477377 SLC25A6P12236 298 aa11.51□□□□□ -0.57
COMMD6-209ENST00000477377 CRYBB3P26998 211 aa11.51□□□□□ -0.57
COMMD6-209ENST00000477377 RND2P52198 227 aa11.51□□□□□ -0.57
COMMD6-209ENST00000477377 RBMS2Q15434 407 aaKnown RBP11.51□□□□□ -0.57
COMMD6-209ENST00000477377 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
COMMD6-209ENST00000477377 OVOL2Q9BRP0 275 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms