RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NIT1Q86X76 327 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 CKAP5Q14008 2032 aa15.51■□□□□ 0.07
VARS2-209ENST00000477288 MYOFQ9NZM1 2061 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 H3BUT2 72 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 DUSP14O95147 198 aaKnown RBP15.5■□□□□ 0.07
VARS2-209ENST00000477288 EFNB1P98172 346 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 SEPSECSQ9HD40 501 aaKnown RBP15.5■□□□□ 0.07
VARS2-209ENST00000477288 PGPEP1LA6NFU8 196 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 FBLIM1Q8WUP2 373 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 ASCL2Q99929 193 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 S100A7L2Q5SY68 101 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 CACNG8Q8WXS5 425 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 MRPS18CQ9Y3D5 142 aaKnown RBP15.5■□□□□ 0.07
VARS2-209ENST00000477288 COQ2Q96H96 371 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 DERL1Q9BUN8 251 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 CACNA1EQ15878 2313 aa15.5■□□□□ 0.07
VARS2-209ENST00000477288 UPK2O00526 184 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 LINC00158P58513 81 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 NHP2Q9NX24 153 aaKnown RBP15.49■□□□□ 0.07
VARS2-209ENST00000477288 PQLC2LA1A4F0 135 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 SAP30O75446 220 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 MPTX1A8MV57 137 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 SRP19P09132 144 aaKnown RBP15.49■□□□□ 0.07
VARS2-209ENST00000477288 WNT2P09544 360 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 SLC50A1Q9BRV3 221 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 SPRR3Q9UBC9 169 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 E9PLN8 166 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 HBDP02042 147 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 NPC2P61916 151 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 LHFPL4Q7Z7J7 247 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 DTX2Q86UW9 622 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 RNF125Q96EQ8 232 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 RTBDNQ9BSG5 229 aaPredicted RBP15.49■□□□□ 0.07
VARS2-209ENST00000477288 SPTBP11277 2137 aa15.49■□□□□ 0.07
VARS2-209ENST00000477288 PLXNA1Q9UIW2 1896 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 SRSF1Q07955 248 aaKnown RBP eCLIP15.48■□□□□ 0.072e-10■□□□□ 10.3
VARS2-209ENST00000477288 CST9LQ9H4G1 147 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 CDK2AP2O75956 126 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 LINC00518Q8N0U6 118 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 DEFB104AQ8WTQ1 72 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 IGHV1-18A0A0C4DH31 117 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 IGLV3-19P01714 112 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 PYYP10082 97 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 UCP1P25874 307 aa15.48■□□□□ 0.07
VARS2-209ENST00000477288 CHTOPQ9Y3Y2 248 aaKnown RBP15.48■□□□□ 0.07
VARS2-209ENST00000477288 PSMG4Q5JS54 123 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 VWCEQ96DN2 955 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 CLDN16Q9Y5I7 305 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 CEP250Q9BV73 2442 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 CNOT1A5YKK6 2376 aaKnown RBP15.47■□□□□ 0.07
VARS2-209ENST00000477288 TIMM23O14925 209 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 IGHV3-73A0A0B4J1V6 119 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 ERVK11-1P61568 191 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 SSC4DQ8WTU2 575 aa15.47■□□□□ 0.07
VARS2-209ENST00000477288 ZNF525Q8N782 197 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 FNDC4Q9H6D8 234 aaPredicted RBP15.46■□□□□ 0.07
VARS2-209ENST00000477288 CYSLTR1Q9Y271 337 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 RGPD3A6NKT7 1758 aaPredicted RBP15.46■□□□□ 0.07
VARS2-209ENST00000477288 PVRIGQ6DKI7 326 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 DEPPQ9NTK1 212 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 TRGV11A0A075B6L2 103 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 ADMP35318 185 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 WBP1Q96G27 269 aa15.46■□□□□ 0.07
VARS2-209ENST00000477288 YPEL1O60688 119 aa15.46■□□□□ 0.06
VARS2-209ENST00000477288 RIPPLY3P57055 190 aa15.46■□□□□ 0.06
VARS2-209ENST00000477288 YPEL2Q96QA6 119 aa15.46■□□□□ 0.06
VARS2-209ENST00000477288 WDR90Q96KV7 1748 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 BRCA1P38398 1863 aaKnown RBP15.45■□□□□ 0.06
VARS2-209ENST00000477288 CKS1BP61024 79 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 MORN2Q502X0 79 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 ASCL4Q6XD76 172 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 PINLYPA6NC86 204 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 SERF1AO75920 110 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 GNLYP22749 145 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 CRIPAKQ8N1N5 446 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 TMEM86BQ8N661 226 aa15.45■□□□□ 0.06
VARS2-209ENST00000477288 DPM2O94777 84 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 SLC25A28Q96A46 364 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 TRAV8-4A0A0B4J246 113 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 GGTLC3B5MD39 225 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 PAX8Q06710 450 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 SLC25A2Q9BXI2 301 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 PSG8Q9UQ74 426 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 HOXA3O43365 443 aaPredicted RBP15.44■□□□□ 0.06
VARS2-209ENST00000477288 RAMP3O60896 148 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 DSCR9P59020 149 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 EPDR1Q9UM22 224 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 CD55P08174 381 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 OR9G9P0C7N8 305 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 SRSF6Q13247 344 aaKnown RBP15.44■□□□□ 0.06
VARS2-209ENST00000477288 TMEM144Q7Z5S9 345 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 EP300Q09472 2414 aaPredicted RBP15.44■□□□□ 0.06
VARS2-209ENST00000477288 ARID2Q68CP9 1835 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 C15orf61A6NNL5 157 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 TMEM219Q86XT9 240 aa15.44■□□□□ 0.06
VARS2-209ENST00000477288 C1QTNF9P0C862 333 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 GATD1Q8NB37 220 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 NRN1Q9NPD7 142 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 PSCAO43653 123 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 IFITM2Q01629 132 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms