RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 OR7C2O60412 319 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 ZNF883P0CG24 379 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 GUSBP1Q15486 140 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 DCAF12Q5T6F0 453 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 ZNF826PQ6ZT77 177 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 PLPPR2Q96GM1 343 aa6.88□□□□□ -1.31
VAPB-205ENST00000476395 BOKQ9UMX3 212 aaPredicted RBP6.88□□□□□ -1.31
VAPB-205ENST00000476395 MAP1BP46821 2468 aaKnown RBP6.88□□□□□ -1.31
VAPB-205ENST00000476395 C2orf70A6NJV1 201 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 PPIAL4DF5H284 164 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 C15orf65H3BRN8 121 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 AREGP15514 252 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 GABRA6Q16445 453 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 CENPWQ5EE01 88 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 FAM90A1Q86YD7 464 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 JMJD8Q96S16 334 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 SERTAD4Q9NUC0 356 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 LIN7CQ9NUP9 197 aaKnown RBP6.87□□□□□ -1.31
VAPB-205ENST00000476395 ATMQ13315 3056 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 ANKRD30BLA7E2S9 258 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 ACTL6BO94805 426 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 SP1P08047 785 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 OR9G9P0C7N8 305 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 IGHV1-2P23083 117 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 LGALS7P47929 136 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 OR1B1Q8NGR6 318 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 LINC00479Q96M42 142 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 RAI1Q7Z5J4 1906 aaPredicted RBP6.87□□□□□ -1.31
VAPB-205ENST00000476395 C17orf112F2Z3M2 114 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 CGAP01215 116 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 CRYBB3P26998 211 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 GATA4P43694 442 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 MOB1BQ7L9L4 216 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 OR2T6Q8NHC8 308 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 DCTN5Q9BTE1 182 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 GNB1LQ9BYB4 327 aa6.87□□□□□ -1.31
VAPB-205ENST00000476395 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 CEP295Q9C0D2 2601 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 RNF212BA8MTL3 300 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 IQCF6A8MYZ5 107 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 HSBP1O75506 76 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 PSG3Q16557 428 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 MSMPQ1L6U9 139 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 ZNF718Q3SXZ3 478 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 SPRNQ5BIV9 151 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 SPACA3Q8IXA5 215 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 DEFB125Q8N687 156 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 OR4S2Q8NH73 311 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 TRAPPC2LQ9UL33 140 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 ZFHX3Q15911 3703 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 OR4C46A6NHA9 309 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 HAND1O96004 215 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 HBZP02008 142 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 CX3CL1P78423 397 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 VKORC1L1Q8N0U8 176 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 TPRX1Q8N7U7 411 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 FER1L6-AS1Q8NA97 138 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 OR4P4Q8NGL7 312 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 OR13A1Q8NGR1 328 aa6.86□□□□□ -1.31
VAPB-205ENST00000476395 MRPL27Q9P0M9 148 aaKnown RBP6.86□□□□□ -1.31
VAPB-205ENST00000476395 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 ZNF134P52741 427 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
VAPB-205ENST00000476395 UBE2G1P62253 170 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 FOXF2Q12947 444 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 OR10J3Q5JRS4 329 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 C19orf35Q6ZS72 473 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 CXorf67Q86X51 503 aaPredicted RBP6.85□□□□□ -1.31
VAPB-205ENST00000476395 SLC25A40Q8TBP6 338 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 DUX5Q96PT3 197 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 MGST2Q99735 147 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 UFC1Q9Y3C8 167 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 SAA2-SAA4A0A096LPE2 208 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 APCSP02743 223 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 MEOX1P50221 254 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 ZNF138P52744 262 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 SMAGPQ0VAQ4 97 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 CCDC144NLQ6NUI1 221 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 CD177Q8N6Q3 437 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 OR52E5Q8NH55 327 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 CHRDL1Q9BU40 450 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 ZNF318Q5VUA4 2279 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 TRAV3A0A0B4J244 114 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 IGLC1P0CG04 106 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 PPIAL4GP0DN37 164 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 USF1P22415 310 aaPredicted RBP6.85□□□□□ -1.31
VAPB-205ENST00000476395 CAMPP49913 170 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 PLA2G2CQ5R387 149 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 HES3Q5TGS1 186 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 WDR82Q6UXN9 313 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 OR8B3Q8NGG8 313 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 GTSF1LQ9H1H1 148 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 TNFRSF19Q9NS68 423 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 ABI3Q9P2A4 366 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 HILPDAQ9Y5L2 63 aa6.85□□□□□ -1.31
VAPB-205ENST00000476395 DCHS2Q6V1P9 2916 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms