RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 CRYGCP07315 174 aa16.24■□□□□ 0.19
ITGA4-207ENST00000476089 LINC00869P0C866 280 aa16.24■□□□□ 0.19
ITGA4-207ENST00000476089 RHOBP62745 196 aa16.24■□□□□ 0.19
ITGA4-207ENST00000476089 CYP2G1PQ6ZSU1 146 aa16.24■□□□□ 0.19
ITGA4-207ENST00000476089 IQCF2Q8IXL9 164 aa16.24■□□□□ 0.19
ITGA4-207ENST00000476089 MAPK1IP1LQ8NDC0 245 aa16.24■□□□□ 0.19
ITGA4-207ENST00000476089 TENM4Q6N022 2769 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 MT-CO2P00403 227 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 FBP1P09467 338 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 PMS2P11Q13670 270 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 HIST2H2BCQ6DN03 193 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 THAP8Q8NA92 274 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 RXFP4Q8TDU9 374 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 Q96MF0 132 aa16.23■□□□□ 0.19
ITGA4-207ENST00000476089 IGHV7-81A0A0B4J1V7 117 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 LOC102723971A0A1B0GUV8 181 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 NPIPB5A8MRT5 1133 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 HSPB1P04792 205 aaKnown RBP16.22■□□□□ 0.19
ITGA4-207ENST00000476089 BCL2P10415 239 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 ICAM4Q14773 271 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 SSX3Q99909 188 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 C19orf24Q9BVV8 132 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 POLQO75417 2590 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 TCRBV4S1A1TA0A5B7 111 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 AVPP01185 164 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 SELENOTP62341 195 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 SLC35E3Q7Z769 313 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 TMEM116Q8NCL8 245 aa16.22■□□□□ 0.19
ITGA4-207ENST00000476089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.21■□□□□ 0.19
ITGA4-207ENST00000476089 GATA2P23769 480 aaPredicted RBP16.21■□□□□ 0.19
ITGA4-207ENST00000476089 TAGLN2P37802 199 aaKnown RBP16.21■□□□□ 0.19
ITGA4-207ENST00000476089 NDPQ00604 133 aa16.21■□□□□ 0.19
ITGA4-207ENST00000476089 KLF17Q5JT82 389 aaPredicted RBP16.21■□□□□ 0.19
ITGA4-207ENST00000476089 TTC9CQ8N5M4 171 aa16.21■□□□□ 0.19
ITGA4-207ENST00000476089 RBM14Q96PK6 669 aaKnown RBP16.21■□□□□ 0.19
ITGA4-207ENST00000476089 MANBALQ9NQG1 85 aa16.21■□□□□ 0.19
ITGA4-207ENST00000476089 VAX2Q9UIW0 290 aa16.21■□□□□ 0.19
ITGA4-207ENST00000476089 MOB4Q9Y3A3 225 aa16.21■□□□□ 0.19
ITGA4-207ENST00000476089 DMRT1Q9Y5R6 373 aa16.21■□□□□ 0.19
ITGA4-207ENST00000476089 IGHV3-21A0A0B4J1V1 117 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 SCO1O75880 301 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 IGHV4-31P0DP07 118 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 PSMB3P49720 205 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 BPIFB3P59826 476 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 TMEM249Q2WGJ8 235 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 NANPQ8TBE9 248 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 TMPRSS5Q9H3S3 457 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 MRPL36Q9P0J6 103 aaKnown RBP16.2■□□□□ 0.18
ITGA4-207ENST00000476089 NAV2Q8IVL1 2488 aa16.2■□□□□ 0.18
ITGA4-207ENST00000476089 I3L2K1 104 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 CXorf1O96002 111 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 GUCA2BQ16661 112 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 FAM78BQ5VT40 261 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 TNFRSF19Q9NS68 423 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 ABCA12Q86UK0 2595 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 IGKV1D-37A0A075B6S9 117 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 SNAPINO95295 136 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 SRP19P09132 144 aaKnown RBP16.19■□□□□ 0.18
ITGA4-207ENST00000476089 STAG3L2P0CL84 134 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 STAG3L3P0CL85 134 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 SOHLH1Q5JUK2 328 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 TMEM219Q86XT9 240 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 C5orf56Q8N8D9 126 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 PIFOQ8TCI5 191 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 TRGV9Q99603 122 aa16.19■□□□□ 0.18
ITGA4-207ENST00000476089 SEPSECSQ9HD40 501 aaKnown RBP16.19■□□□□ 0.18
ITGA4-207ENST00000476089 ZNF90Q03938 601 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 ASPHD1Q5U4P2 390 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 SGMS2Q8NHU3 365 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 RNF2Q99496 336 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 HSPB9Q9BQS6 159 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 THYN1Q9P016 225 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 VPS13CQ709C8 3753 aa16.18■□□□□ 0.18
ITGA4-207ENST00000476089 MAP1AP78559 2803 aaPredicted RBP16.18■□□□□ 0.18
ITGA4-207ENST00000476089 CEBPGP53567 150 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 OR1L4Q8NGR5 311 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 OR4X1Q8NH49 305 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 GATAD1Q8WUU5 269 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 PFDN5Q99471 154 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 NKX6-2Q9C056 277 aaPredicted RBP16.17■□□□□ 0.18
ITGA4-207ENST00000476089 FUT9Q9Y231 359 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 H3BUX3 64 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 ARL14EPLP0DKL9 152 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 EGR2P11161 476 aaPredicted RBP16.17■□□□□ 0.18
ITGA4-207ENST00000476089 TMUB1Q9BVT8 246 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 DNAJC4Q9NNZ3 241 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 PITPNC1Q9UKF7 332 aa16.17■□□□□ 0.18
ITGA4-207ENST00000476089 COX7A2P2O60397 106 aa16.16■□□□□ 0.18
ITGA4-207ENST00000476089 SPNS3Q6ZMD2 512 aa16.16■□□□□ 0.18
ITGA4-207ENST00000476089 OR5T1Q8NG75 326 aa16.16■□□□□ 0.18
ITGA4-207ENST00000476089 SOX21Q9Y651 276 aaPredicted RBP16.16■□□□□ 0.18
ITGA4-207ENST00000476089 CSMD2Q7Z408 3487 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 IGLV11-55A0A075B6I3 123 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 K7EIM0 57 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 OR5G3P0C626 314 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 TAS2R45P59539 299 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 MEF2BQ02080 365 aaPredicted RBP16.15■□□□□ 0.18
ITGA4-207ENST00000476089 SPATA31B1PQ5VZV4 182 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 UNQ5815/PRO19632Q6UWF5 114 aa16.15■□□□□ 0.18
ITGA4-207ENST00000476089 KRTAP1-3Q8IUG1 177 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms