RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 DYNAPQ8N1N2 210 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 OR5C1Q8NGR4 320 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 MBD3L1Q8WWY6 194 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 DNAJC9Q8WXX5 260 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 RMND5BQ96G75 393 aaPredicted RBP2.71□□□□□ -1.98
SMC5-203ENST00000475540 SCGB3A1Q96QR1 104 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 EFCAB11Q9BUY7 163 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 OR2J1Q9GZK6 312 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 LRTM1Q9HBL6 345 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 TIMM22Q9Y584 194 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 HSPE1-MOB4S4R3N1 261 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 MYH3P11055 1940 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 CACNA1SQ13698 1873 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 MYH2Q9UKX2 1941 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 C11orf86A6NJI1 115 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 SLC22A1O15245 554 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 BPGMP07738 259 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 NFYAP23511 347 aaPredicted RBP2.7□□□□□ -1.98
SMC5-203ENST00000475540 SRIP30626 198 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 PYDC2Q56P42 97 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 MIR17HGQ75NE6 70 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 OR10J5Q8NHC4 309 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 TERB2Q8NHR7 220 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 C6orf62Q9GZU0 229 aaPredicted RBP2.7□□□□□ -1.98
SMC5-203ENST00000475540 MED11Q9P086 117 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 CKLFQ9UBR5 152 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 NAT8Q9UHE5 227 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 TIMM9Q9Y5J7 89 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 ZSWIM8A7E2V4 1837 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 LCTP09848 1927 aa2.7□□□□□ -1.98
SMC5-203ENST00000475540 MAST2Q6P0Q8 1798 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 TOPBP1Q92547 1522 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 C1orf196B1AJZ1 125 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 H3BT86 120 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 CST8O60676 142 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 FAM107AO95990 144 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 HMGN1P05114 100 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 OGNP20774 298 aaKnown RBP2.69□□□□□ -1.98
SMC5-203ENST00000475540 RPL28P46779 137 aaKnown RBP2.69□□□□□ -1.98
SMC5-203ENST00000475540 EVX1P49640 407 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 SMCO1Q147U7 214 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 LTC4SQ16873 150 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 LINC01554Q52M75 96 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 BCL2L15Q5TBC7 163 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 LYZL1Q6UWQ5 148 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 Q6ZS52 159 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 CROCCP2Q86T23 111 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 BPIFA4PQ86YQ2 179 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 HIST3H2BBQ8N257 126 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 MINOS1-NBL1R4GNA1 71 aa2.69□□□□□ -1.98
SMC5-203ENST00000475540 A0A087X0T9 212 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 ARL5CA6NH57 179 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 ZNF860A6NHJ4 632 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 GGCTO75223 188 aaKnown RBP2.68□□□□□ -1.98
SMC5-203ENST00000475540 DHFRP00374 187 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 CCR2P41597 374 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 GTF2A1P52655 376 aaPredicted RBP2.68□□□□□ -1.98
SMC5-203ENST00000475540 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 SLC35E3Q7Z769 313 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 ANGPTL5Q86XS5 388 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 OR9Q1Q8NGQ5 310 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 OR5J2Q8NH18 312 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 MAFIPQ8WZ33 124 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 C11orf40Q8WZ69 217 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 SLAMF6Q96DU3 332 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 GINS4Q9BRT9 223 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 RTL8AQ9BWD3 113 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 ZNF471Q9BX82 626 aaPredicted RBP2.68□□□□□ -1.98
SMC5-203ENST00000475540 TMEM133Q9H2Q1 129 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 OSTCQ9NRP0 149 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 SPANXCQ9NY87 97 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 PCTPQ9UKL6 214 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 PRR14LQ5THK1 2151 aa2.68□□□□□ -1.98
SMC5-203ENST00000475540 TRAV7A0A075B6U4 112 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 A0A0J9YX75 114 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 TMEM212A6NML5 194 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 G3V3Q6 166 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 KPNA4O00629 521 aaPredicted RBP2.67□□□□□ -1.98
SMC5-203ENST00000475540 TAX1BP3O14907 124 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 OR10J4P0C629 311 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 SRP14P37108 136 aaKnown RBP2.67□□□□□ -1.98
SMC5-203ENST00000475540 EIF5AP63241 154 aaKnown RBP2.67□□□□□ -1.98
SMC5-203ENST00000475540 PABPC1L2AQ5JQF8 200 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 TCF24Q7RTU0 167 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 RPP25LQ8N5L8 163 aaKnown RBP2.67□□□□□ -1.98
SMC5-203ENST00000475540 OR51T1Q8NGJ9 327 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 OR4C16Q8NGL9 310 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 OR8D4Q8NGM9 314 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 THEM6Q8WUY1 208 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 CANT1Q8WVQ1 401 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 YPEL2Q96QA6 119 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 HSPB9Q9BQS6 159 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 HHLA3Q9XRX5 114 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 ASB4Q9Y574 426 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 SHANK3Q9BYB0 1731 aa2.67□□□□□ -1.98
SMC5-203ENST00000475540 CAMSAP2Q08AD1 1489 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 H7C2G1 150 aa2.66□□□□□ -1.98
SMC5-203ENST00000475540 EIF2B2P49770 351 aaKnown RBP2.66□□□□□ -1.98
SMC5-203ENST00000475540 HCP5Q6MZN7 132 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms