RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 A0A1W2PS18 150 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 IGKV1-39P01597 117 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 IGHV3-48P01763 117 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 IGKV1D-39P04432 117 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 UCP3P55916 312 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 TAS2R20P59543 309 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 TBC1D26Q86UD7 250 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 LYSMD2Q8IV50 215 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 FAM24BQ8N5W8 94 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
PCGF3-209ENST00000475288 RNF126Q9BV68 326 aa12.93□□□□□ -0.34
PCGF3-209ENST00000475288 K7EQG2 157 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 CORTO00230 105 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 ZNF182P17025 639 aaPredicted RBP12.92□□□□□ -0.34
PCGF3-209ENST00000475288 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 PRSS3P35030 304 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 HRH1P35367 487 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 RORCP51449 518 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
PCGF3-209ENST00000475288 SLIRPQ9GZT3 109 aaKnown RBP12.92□□□□□ -0.34
PCGF3-209ENST00000475288 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 A0A1B0GU03 582 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 A0A1B0GVY2 172 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 TMEM50AO95807 157 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 NPPCP23582 126 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 CRYBB3P26998 211 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
PCGF3-209ENST00000475288 MRGPRFQ96AM1 343 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 X6R8D5 127 aa12.91□□□□□ -0.34
PCGF3-209ENST00000475288 AMBPP02760 352 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 SNCAP37840 140 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 Q6ZTC4 211 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 CENPSQ8N2Z9 138 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 GPX8Q8TED1 209 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 AP3S1Q92572 193 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 RABAC1Q9UI14 185 aa12.9□□□□□ -0.34
PCGF3-209ENST00000475288 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
PCGF3-209ENST00000475288 IGHV3-66A0A0C4DH42 116 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 P0C879 139 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 C4BPBP20851 252 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 HLA-DMAP28067 261 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 TSPAN5P62079 268 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 SAMD12Q8N8I0 201 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 DCANP1Q8TF63 244 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 METTL26Q96S19 204 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 SCPEP1Q9HB40 452 aa12.89□□□□□ -0.35
PCGF3-209ENST00000475288 DYNC1H1Q14204 4646 aaKnown RBP12.89□□□□□ -0.35
PCGF3-209ENST00000475288 CLN5O75503 358 aa12.88□□□□□ -0.35
PCGF3-209ENST00000475288 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
PCGF3-209ENST00000475288 MED14OSP0DP75 135 aa12.88□□□□□ -0.35
PCGF3-209ENST00000475288 SUB1P53999 127 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCGF3-209ENST00000475288 RND3P61587 244 aa12.88□□□□□ -0.35
PCGF3-209ENST00000475288 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
PCGF3-209ENST00000475288 PKD1P98161 4303 aa12.88□□□□□ -0.35
PCGF3-209ENST00000475288 P0DMU3 169 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 RNASE2P10153 161 aaKnown RBP12.87□□□□□ -0.35
PCGF3-209ENST00000475288 P2RY1P47900 373 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 SLC35G3Q8N808 338 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 ZNF486Q96H40 463 aaPredicted RBP12.87□□□□□ -0.35
PCGF3-209ENST00000475288 NARS2Q96I59 477 aaKnown RBP12.87□□□□□ -0.35
PCGF3-209ENST00000475288 DNAH11Q96DT5 4516 aa12.87□□□□□ -0.35
PCGF3-209ENST00000475288 AGRNO00468 2067 aa12.86□□□□□ -0.35
PCGF3-209ENST00000475288 A0A0B4J293 547 aa12.86□□□□□ -0.35
PCGF3-209ENST00000475288 ZNF688P0C7X2 276 aa12.86□□□□□ -0.35
PCGF3-209ENST00000475288 EIF2B2P49770 351 aaKnown RBP12.86□□□□□ -0.35
PCGF3-209ENST00000475288 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
PCGF3-209ENST00000475288 MCFD2Q8NI22 146 aa12.86□□□□□ -0.35
PCGF3-209ENST00000475288 U3KQE9 123 aa12.86□□□□□ -0.35
PCGF3-209ENST00000475288 TRAV30A0A087WSZ9 112 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 ATG12O94817 140 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 RCVRNP35243 200 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 BSXQ3C1V8 233 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 MZT2AQ6P582 158 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
PCGF3-209ENST00000475288 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
PCGF3-209ENST00000475288 SEPSECSQ9HD40 501 aaKnown RBP12.85□□□□□ -0.35
PCGF3-209ENST00000475288 DEFB131BA0A096LNP1 70 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 HELTA6NFD8 242 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 KNCNA6PVL3 124 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 IFNA17P01571 189 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 IGKV1-17P01599 117 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 APOA1P02647 267 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 AP2S1P53680 142 aaPredicted RBP12.84□□□□□ -0.35
PCGF3-209ENST00000475288 IZUMO4Q1ZYL8 232 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 PDCD10Q9BUL8 212 aa12.84□□□□□ -0.35
PCGF3-209ENST00000475288 MRPL36Q9P0J6 103 aaKnown RBP12.84□□□□□ -0.35
PCGF3-209ENST00000475288 OPRK1P41145 380 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 AKR1C2P52895 323 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms