RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ZNF137PP52743 207 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 MRPL52Q86TS9 123 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 LOXL4Q96JB6 756 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 OR2V2Q96R30 315 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 WASHC3Q9Y3C0 194 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 DMXL1Q9Y485 3027 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 SMIM27A0A1W2PRY6 76 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 LNP1A1A4G5 178 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 E7EUB6 86 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 C10orf55Q5SWW7 151 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 INO80CQ6PI98 192 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 SPRY4Q9C004 299 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 MGST3O14880 152 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 LAMTOR5O43504 91 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 APELAP0DMC3 54 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 PPOXP50336 477 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 RBX1P62877 108 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 SRSF6Q13247 344 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 C9orf106Q8NAJ2 232 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 CRYABP02511 175 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 BLNKQ8WV28 456 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
SEMA4D-217ENST00000475255 IGHV2OR16-5A0A0B4J2B6 119 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 ZNF138P52744 262 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 UBE2V1Q13404 147 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 DHRS13Q6UX07 377 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 Q6ZT83 130 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 SLC25A33Q9BSK2 321 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 TNFRSF19Q9NS68 423 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 FOXA2Q9Y261 457 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 NKX6-3A6NJ46 265 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 IGKV3-15P01624 115 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 FBLN7Q53RD9 439 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 ATMQ13315 3056 aa11.16□□□□□ -0.62
SEMA4D-217ENST00000475255 IGHV3-21A0A0B4J1V1 117 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 TEX50A0A1B0GTY4 177 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 SRRM5B3KS81 715 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 CSN3P07498 182 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 CA7P43166 264 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 ZNF596Q8TC21 504 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 CSMD1Q96PZ7 3565 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 FAM90A9PA6NNJ1 464 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 ZNF891A8MT65 544 aaPredicted RBP11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 REG1AP05451 166 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 SELENOVP59797 346 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 COTL1Q14019 142 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 ITLN1Q8WWA0 313 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 CCL13Q99616 98 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 ASCL2Q99929 193 aa11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 SLC25A10Q9UBX3 287 aaPredicted RBP11.15□□□□□ -0.62
SEMA4D-217ENST00000475255 J3QW42 95 aa11.15□□□□□ -0.63
SEMA4D-217ENST00000475255 KLF3P57682 345 aaPredicted RBP11.15□□□□□ -0.63
SEMA4D-217ENST00000475255 Q71RC1 249 aaPredicted RBP11.15□□□□□ -0.63
SEMA4D-217ENST00000475255 OR5B3Q8NH48 314 aa11.15□□□□□ -0.63
SEMA4D-217ENST00000475255 NUDT3O95989 172 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 ACP1P24666 158 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 UBE2G1P62253 170 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 LDLRAD2Q5SZI1 272 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 TMEM164Q5U3C3 297 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 ARRDC1-AS1Q9H2J1 176 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 F2RL2O00254 374 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 SAA1P0DJI8 122 aaPredicted RBP11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 TAS2R45P59539 299 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 RUSC1-AS1Q66K80 236 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 URB1-AS1Q96HZ7 61 aa11.14□□□□□ -0.63
SEMA4D-217ENST00000475255 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 CT45A6P0DMU7 189 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 CT45A5P0DMU8 189 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 CT45A7P0DMV0 189 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 OR4F17Q8NGA8 305 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms