RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SLC24A4Q8NFF2 622 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 OR4D5Q8NGN0 318 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 RANGRFQ9HD47 186 aaPredicted RBP9.09□□□□□ -0.95
CLIP2-204ENST00000474962 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 C7orf66A4D0T2 115 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 LINC01619G3V211 115 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 SAP30O75446 220 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 HSPB1P04792 205 aaKnown RBP9.08□□□□□ -0.96
CLIP2-204ENST00000474962 IFNA4P05014 189 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 PVALBP20472 110 aaPredicted RBP9.08□□□□□ -0.96
CLIP2-204ENST00000474962 NPY1RP25929 384 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 S100A10P60903 97 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 POLR2GP62487 172 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLIP2-204ENST00000474962 C2orf83Q53S99 150 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 VN1R17PQ8TDU5 208 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 PEF1Q9UBV8 284 aaKnown RBP9.08□□□□□ -0.96
CLIP2-204ENST00000474962 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
CLIP2-204ENST00000474962 U3KQK5 164 aa9.08□□□□□ -0.96
CLIP2-204ENST00000474962 IGHV3-21A0A0B4J1V1 117 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 RPS10-NUDT3A0A1W2PQS6 291 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 SSSCA1O60232 199 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 SCGB2A1O75556 95 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 SIX6O95475 246 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 IGHV3-23P01764 117 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 RLN2P04090 185 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 RNASE2P10153 161 aaKnown RBP9.07□□□□□ -0.96
CLIP2-204ENST00000474962 OPRK1P41145 380 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 Q56UQ5 140 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 ETFRF1Q6IPR1 90 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 ZNF343Q6P1L6 599 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 UBAC2Q8NBM4 344 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 RAB40CQ96S21 281 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 GAR1Q9NY12 217 aaKnown RBP9.07□□□□□ -0.96
CLIP2-204ENST00000474962 PSENENQ9NZ42 101 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 STRAPQ9Y3F4 350 aaKnown RBP9.07□□□□□ -0.96
CLIP2-204ENST00000474962 S4R3C0 116 aa9.07□□□□□ -0.96
CLIP2-204ENST00000474962 MT-CO2P00403 227 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 MBPP02686 304 aaPredicted RBP9.06□□□□□ -0.96
CLIP2-204ENST00000474962 ZP3P21754 424 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 MFAP2P55001 183 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 RPEL1Q2QD12 228 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 SPANXN5Q5MJ07 72 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 ACSM6Q6P461 480 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 CLEC19AQ6UXS0 136 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 RNASEH2CQ8TDP1 164 aaKnown RBP9.06□□□□□ -0.96
CLIP2-204ENST00000474962 NMES1Q9C002 83 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 DMRT1Q9Y5R6 373 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 SMAD5-AS1Q9Y6J3 95 aa9.06□□□□□ -0.96
CLIP2-204ENST00000474962 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
CLIP2-204ENST00000474962 MFSD2BA6NFX1 497 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 CLEC3BP05452 202 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 ARL3P36405 182 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 NPBWR1P48145 328 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 BCAP31P51572 246 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 MFAP4P55083 255 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 BSXQ3C1V8 233 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 HAPLN4Q86UW8 402 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 SCARB1Q8WTV0 552 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 SMIM8Q96KF7 97 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 TXN2Q99757 166 aa9.05□□□□□ -0.96
CLIP2-204ENST00000474962 RCL1Q9Y2P8 373 aaKnown RBP9.05□□□□□ -0.96
CLIP2-204ENST00000474962 H3BP45 60 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 I3L2K1 104 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 K7EIM0 57 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 GNG7O60262 68 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 GGCTO75223 188 aaKnown RBP9.04□□□□□ -0.96
CLIP2-204ENST00000474962 PET100P0DJ07 73 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 SLC25A4P12235 298 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 GP9P14770 177 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 GPR183P32249 361 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 TAS2R30P59541 319 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 RAB32Q13637 225 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 LRRC37A5PQ49AS3 106 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 ZNF502Q8TBZ5 544 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
CLIP2-204ENST00000474962 OR2T8A6NH00 312 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 A6NJY4 79 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 PPP5D1E7EU14 171 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 K7EPK0 472 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 NUPL2O15504 423 aaKnown RBP9.03□□□□□ -0.96
CLIP2-204ENST00000474962 TSC22D2O75157 780 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 CAV2P51636 162 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 RRAS2P62070 204 aaPredicted RBP9.03□□□□□ -0.96
CLIP2-204ENST00000474962 FCN2Q15485 313 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 FAM106AQ4KMX7 169 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 SPSB3Q6PJ21 355 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 BSCL2Q96G97 398 aaPredicted RBP9.03□□□□□ -0.96
CLIP2-204ENST00000474962 SLC35E1Q96K37 410 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 ZC4H2Q9NQZ6 224 aa9.03□□□□□ -0.96
CLIP2-204ENST00000474962 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms