RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 CSPG4Q6UVK1 2322 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 A0A1B0GW64 132 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 CLPSL1A2RUU4 121 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 ZNF705EA8MWA4 302 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-206ENST00000474564 GNG7O60262 68 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 OR2J3O76001 311 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 MT-CO2P00403 227 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 IGHG4P01861 327 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 S100A7P31151 101 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 CAMLGP49069 296 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 Q56UQ5 140 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 TMEM182Q6ZP80 229 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-206ENST00000474564 SLC16A13Q7RTY0 426 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 S100A7AQ86SG5 101 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 OR5AU1Q8NGC0 362 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 PCNPQ8WW12 178 aaKnown RBP8.12□□□□□ -1.11
COL12A1-206ENST00000474564 ACY3Q96HD9 319 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 CYTL1Q9NRR1 136 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 RNF114Q9Y508 228 aa8.12□□□□□ -1.11
COL12A1-206ENST00000474564 IGLV11-55A0A075B6I3 123 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 HAX1O00165 279 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 SOX15O60248 233 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 SEC11BP0C7V7 166 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
COL12A1-206ENST00000474564 RAB9AP51151 201 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 RAB2AP61019 212 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 BLOC1S1P78537 153 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 ZNF616Q08AN1 781 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 ASPHD1Q5U4P2 390 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 Q6ZS46 218 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 ZNF329Q86UD4 541 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 KLHDC1Q8N7A1 406 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 GINS3Q9BRX5 216 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 WFDC1Q9HC57 220 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 C21orf62Q9NYP8 219 aa8.11□□□□□ -1.11
COL12A1-206ENST00000474564 TRBV9A0A0B4J1U6 114 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 TEX46H3BTG2 121 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 NUPL2O15504 423 aaKnown RBP8.1□□□□□ -1.11
COL12A1-206ENST00000474564 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 ATP6V0CP27449 155 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 SELENOTP62341 195 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 TMEM95Q3KNT9 176 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 C19orf54Q5BKX5 351 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 KHDC1LQ5JSQ8 128 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 PVRIGQ6DKI7 326 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 TMEM144Q7Z5S9 345 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 COMMD7Q86VX2 200 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 OR4X1Q8NH49 305 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 LINC01006Q8NI28 216 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 SERTAD4Q9NUC0 356 aa8.1□□□□□ -1.11
COL12A1-206ENST00000474564 TCRBV4S1A1TA0A5B7 111 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 PMS2P5A8MQ11 134 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 UMAD1C9J7I0 102 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 I3L2K1 104 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 NDUFB8O95169 186 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 SULT1A2P50226 295 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 RAB5CP51148 216 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 RND2P52198 227 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 ELLP55199 621 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-206ENST00000474564 RUNX1Q01196 453 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 GAMTQ14353 236 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 KLK9Q2XQG4 91 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 SPSB3Q6PJ21 355 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 Q6ZRG5 221 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 TMEM116Q8NCL8 245 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 FAM213BQ8TBF2 198 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 NPIPB3Q92617 1050 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 CITED4Q96RK1 184 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
COL12A1-206ENST00000474564 WDR61Q9GZS3 305 aaKnown RBP8.09□□□□□ -1.11
COL12A1-206ENST00000474564 SH3BGRL3Q9H299 93 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 KLK9Q9UKQ9 250 aa8.09□□□□□ -1.11
COL12A1-206ENST00000474564 TEX15Q9BXT5 2789 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 NUDT19A8MXV4 375 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 CLN5O75503 358 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 SPP1P10451 314 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 PSMB8P28062 276 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 OR10J1P30954 320 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 MFAP2P55001 183 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 CFHR3Q02985 330 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 RELQ04864 619 aaPredicted RBP8.08□□□□□ -1.12
COL12A1-206ENST00000474564 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 VWC2Q2TAL6 325 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 HAPLN4Q86UW8 402 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 SLC7A5P1Q8MH63 180 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 Q8WTZ3 238 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 TMEM158Q8WZ71 300 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 TAF15Q92804 592 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL12A1-206ENST00000474564 UBE2E2Q96LR5 201 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 PSMG3Q9BT73 122 aaPredicted RBP8.08□□□□□ -1.12
COL12A1-206ENST00000474564 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms