RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 VWC2Q2TAL6 325 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 C15orf32Q32M92 178 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 FAM209BQ5JX69 171 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 ASPHD1Q5U4P2 390 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 TEX261Q6UWH6 196 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 ALKAL2Q6UX46 152 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM144Q7Z5S9 345 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 S100A7AQ86SG5 101 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 COMMD1Q8N668 190 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 LRRC20Q8TCA0 184 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 BSCL2Q96G97 398 aaPredicted RBP8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 SLC25A32Q9H2D1 315 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 GNB4Q9HAV0 340 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 C21orf62Q9NYP8 219 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 WDR83OSQ9Y284 106 aa8.07□□□□□ -1.12
PRPF38A-202ENST00000474048 CSMD1Q96PZ7 3565 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TRBV7-1A0A0A6YYK4 115 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM89A2RUT3 159 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 LINC01548A6NM66 108 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TEX46H3BTG2 121 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 NUPL2O15504 423 aaKnown RBP8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 IGHV3-48P01763 117 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 ATP6V0CP27449 155 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 OR10J1P30954 320 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 S100A7P31151 101 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 RAB2AP61019 212 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 SELENOTP62341 195 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 GAMTQ14353 236 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM95Q3KNT9 176 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 KHDC1LQ5JSQ8 128 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM182Q6ZP80 229 aaPredicted RBP8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 Q6ZRG5 221 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 C19orf35Q6ZS72 473 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 OR4F5Q8NH21 305 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 SCARB1Q8WTV0 552 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM170AQ8WVE7 144 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TMED6Q8WW62 240 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 NPIPB3Q92617 1050 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 USMG5Q96IX5 58 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TXN2Q99757 166 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 GINS3Q9BRX5 216 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 PSMG3Q9BT73 122 aaPredicted RBP8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 NPCDR1Q9BY65 106 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 WFDC1Q9HC57 220 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 ESM1Q9NQ30 184 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 TLN2Q9Y4G6 2542 aa8.06□□□□□ -1.12
PRPF38A-202ENST00000474048 ACANP16112 2415 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 ZANQ9Y493 2812 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 UMAD1C9J7I0 102 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 PRSS46E5RG02 174 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 AGPAT2O15120 278 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 TSPAN15O95858 294 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 ELANEP08246 267 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 RAB5CP51148 216 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 MFAP2P55001 183 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 ELLP55199 621 aaPredicted RBP8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 SERF2P84101 59 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 RUNX1Q01196 453 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 ACOT6Q3I5F7 207 aaPredicted RBP8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 FFAR4Q5NUL3 377 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 ZNF329Q86UD4 541 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 Q8N2B8 174 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 ZNF680Q8NEM1 530 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 BPIFCQ8NFQ6 507 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 OR4X1Q8NH49 305 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 RSG1Q9BU20 258 aa8.05□□□□□ -1.12
PRPF38A-202ENST00000474048 A0A1W2PPV4 95 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 TCRBV4S1A1TA0A5B7 111 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 I3L2K1 104 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 CLN5O75503 358 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 NDUFB8O95169 186 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 CFDP00746 253 aaPredicted RBP8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 IGHG4P01861 327 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 SPP1P10451 314 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 B2MP61769 119 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 ZNF616Q08AN1 781 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 FOXE3Q13461 319 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 PVRIGQ6DKI7 326 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 Q6ZS46 218 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 CYP2G1PQ6ZSU1 146 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 Q6ZSV7 163 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 TRGV9Q99603 122 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 SH3BGRL3Q9H299 93 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 FNDC4Q9H6D8 234 aaPredicted RBP8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 PXMP4Q9Y6I8 212 aa8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
PRPF38A-202ENST00000474048 TRBV9A0A0B4J1U6 114 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 MFSD2BA6NFX1 497 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 OR2T8A6NH00 312 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 ZNF705EA8MWA4 302 aaPredicted RBP8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 K7EIM0 57 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 COX7A2P2O60397 106 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 NDUFA7O95182 113 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms