RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 TMPRSS5Q9H3S3 457 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 RBKSQ9H477 322 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 C11orf1Q9H5F2 150 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.05□□□□□ -1.6
HDAC1-205ENST00000472928 BET1LQ9NYM9 111 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 HSPB7Q9UBY9 170 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 PRNDQ9UKY0 176 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 FOXA2Q9Y261 457 aaPredicted RBP5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CBY1Q9Y3M2 126 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 A0A0D9SG52 128 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 A0A0U1RQK1 487 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 KANTRA0A1W2PQU2 76 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 IGSF23A1L1A6 192 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 SRRM4A7MD48 611 aaKnown RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 C1orf196B1AJZ1 125 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 UPK2O00526 184 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 BCL2L11O43521 198 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 CHST1O43916 411 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 SPDEFO95238 335 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 MOSP00540 346 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 IGKV1D-33P01593 117 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 IGKV1-33P01594 117 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 MYOD1P15172 320 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 CD24P25063 80 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 CD1BP29016 333 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 RPL12P30050 165 aaKnown RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 P2RY1P47900 373 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 LINC00310P59036 64 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 UBE2KP61086 200 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 SNRPEP62304 92 aaKnown RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 RPL23AP62750 156 aaKnown RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 RPL8P62917 257 aaKnown RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 HABP2Q14520 560 aaPredicted RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 PLGLAQ15195 96 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 MMDQ15546 238 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 ACOT7LQ6ZUV0 252 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 KCNRGQ8N5I3 272 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 C15orf54Q8N8G6 183 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 OR4A5Q8NH83 315 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM167AQ8TBQ9 72 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 RXFP4Q8TDU9 374 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 DTD1Q8TEA8 209 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 AQP10Q96PS8 301 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 RAB40CQ96S21 281 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 CLCC1Q96S66 551 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 HINT2Q9BX68 163 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 LYRM2Q9NU23 88 aaPredicted RBP5.04□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM14BQ9NUH8 114 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 FBXL17Q9UF56 701 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 TCF19Q9Y242 345 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 SIGLEC9Q9Y336 463 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 OR51B2Q9Y5P1 312 aa5.04□□□□□ -1.6
HDAC1-205ENST00000472928 FAM24AA6NFZ4 105 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 COLCA2A8K830 154 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 NBR2O15453 112 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM50AO95807 157 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM11P17152 192 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 RAB4AP20338 218 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 LGALS7P47929 136 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 GNB1P62873 340 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 PRCDQ00LT1 54 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 EWSR1Q01844 656 aaKnown RBP eCLIP5.03□□□□□ -1.6
HDAC1-205ENST00000472928 HNF4GQ14541 408 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 PEA15Q15121 130 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 PSG5Q15238 335 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 AARDQ4LEZ3 155 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 KHDC1LQ5JSQ8 128 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 FAM74A1Q5RGS3 127 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 C10orf55Q5SWW7 151 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 ZNF429Q86V71 674 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 C11orf44Q8N8P7 122 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 OR2T10Q8NGZ9 312 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 MALSU1Q96EH3 234 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 BSCL2Q96G97 398 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-205ENST00000472928 RITA1Q96K30 269 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 CIB3Q96Q77 187 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-205ENST00000472928 OR4C12Q96R67 309 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 PFDN5Q99471 154 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 C2orf88Q9BSF0 95 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 C1orf43Q9BWL3 253 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 ZNF471Q9BX82 626 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-205ENST00000472928 SEC11CQ9BY50 192 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 SMIM3Q9BZL3 60 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 SLC25A31Q9H0C2 315 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 FBXL15Q9H469 300 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 ZNF430Q9H8G1 570 aaPredicted RBP5.03□□□□□ -1.6
HDAC1-205ENST00000472928 PLEKHA3Q9HB20 300 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 ENY2Q9NPA8 101 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 SMCO4Q9NRQ5 59 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 PSENENQ9NZ42 101 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 KIAA1456Q9P272 454 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 WSB1Q9Y6I7 421 aa5.03□□□□□ -1.6
HDAC1-205ENST00000472928 RRHO14718 337 aa5.02□□□□□ -1.61
HDAC1-205ENST00000472928 CST7O76096 145 aa5.02□□□□□ -1.61
HDAC1-205ENST00000472928 ACTL6BO94805 426 aa5.02□□□□□ -1.61
HDAC1-205ENST00000472928 METTL15P1P0C7V9 234 aa5.02□□□□□ -1.61
HDAC1-205ENST00000472928 BRS3P32247 399 aa5.02□□□□□ -1.61
HDAC1-205ENST00000472928 RPL27AP46776 148 aaKnown RBP5.02□□□□□ -1.61
HDAC1-205ENST00000472928 PAX9P55771 341 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms