RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 NARS2Q96I59 477 aaKnown RBP11.56□□□□□ -0.56
HIF3A-206ENST00000472815 SMDT1Q9H4I9 107 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
HIF3A-206ENST00000472815 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 A6NDX4 124 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 FSHBP01225 129 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 IFNA1P01562 189 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 FABP1P07148 127 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 OR10J1P30954 320 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 RND2P52198 227 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 MFAP2P55001 183 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 NDPQ00604 133 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 TOR2AQ5JU69 321 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
HIF3A-206ENST00000472815 NPIPB3Q92617 1050 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
HIF3A-206ENST00000472815 TREM1Q9NP99 234 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 TCRBV4S1A1TA0A5B7 111 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 SEC14L6B5MCN3 397 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 ZP3P21754 424 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 RHOBP62745 196 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 PRR20EP86478 221 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 PRR20CP86479 221 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 PRR20DP86480 221 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 PRR20BP86481 221 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 PRR20AP86496 221 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 AKIRIN2Q53H80 203 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 FAM122CQ6P4D5 195 aa11.55□□□□□ -0.56
HIF3A-206ENST00000472815 TEX15Q9BXT5 2789 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 TAGLN2P37802 199 aaKnown RBP11.54□□□□□ -0.56
HIF3A-206ENST00000472815 LY6EQ16553 131 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 MLANAQ16655 118 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 GUK1Q16774 197 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 DEFB112Q30KQ8 113 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 UNQ5815/PRO19632Q6UWF5 114 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 LCN15Q6UWW0 184 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 BPIFCQ8NFQ6 507 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-206ENST00000472815 RNF2Q99496 336 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 TRGV9Q99603 122 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 HSPB9Q9BQS6 159 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 SLC25A22Q9H936 323 aa11.54□□□□□ -0.56
HIF3A-206ENST00000472815 ABCA1O95477 2261 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 IGKV1OR2-108A0A075B7D4 117 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 A0A1B0GV50 99 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 I3L2K1 104 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 SMAD7O15105 426 aaKnown RBP11.53□□□□□ -0.56
HIF3A-206ENST00000472815 ATP6V0E1O15342 81 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 NPBWR1P48145 328 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 PPT1P50897 306 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 ECSCRQ19T08 205 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 RBMS3Q6XE24 437 aaKnown RBP11.53□□□□□ -0.56
HIF3A-206ENST00000472815 OR1L4Q8NGR5 311 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 RAB24Q969Q5 203 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 PFDN5Q99471 154 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
HIF3A-206ENST00000472815 ZNF469Q96JG9 3925 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-206ENST00000472815 OTOGQ6ZRI0 2925 aa11.52□□□□□ -0.56
HIF3A-206ENST00000472815 IGLV11-55A0A075B6I3 123 aa11.52□□□□□ -0.56
HIF3A-206ENST00000472815 TRAV30A0A087WSZ9 112 aa11.52□□□□□ -0.56
HIF3A-206ENST00000472815 YIF1AO95070 293 aa11.52□□□□□ -0.56
HIF3A-206ENST00000472815 ZNF726P1Q15940 193 aa11.52□□□□□ -0.56
HIF3A-206ENST00000472815 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.56
HIF3A-206ENST00000472815 FLNAP21333 2647 aaKnown RBP11.52□□□□□ -0.57
HIF3A-206ENST00000472815 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 CD5P06127 495 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 EGR2P11161 476 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-206ENST00000472815 IER3P46695 156 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 CRIP2P52943 208 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-206ENST00000472815 PMS2P11Q13670 270 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 C19orf35Q6ZS72 473 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 DMRT1Q9Y5R6 373 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 CSPG4Q6UVK1 2322 aa11.52□□□□□ -0.57
HIF3A-206ENST00000472815 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 LINC00869P0C866 280 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 PSMB3P49720 205 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 MFAP4P55083 255 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 TAS2R45P59539 299 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 SPNS3Q6ZMD2 512 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 SLC35E3Q7Z769 313 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 ZNF48Q96MX3 618 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-206ENST00000472815 MRPL32Q9BYC8 188 aaKnown RBP11.51□□□□□ -0.57
HIF3A-206ENST00000472815 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
HIF3A-206ENST00000472815 ELOA3CA0A087WX78 387 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-206ENST00000472815 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 K7EIM0 57 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 CLN5O75503 358 aa11.5□□□□□ -0.57
HIF3A-206ENST00000472815 CXorf1O96002 111 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms